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OPENSEQ.org

FLIY - YECS
UniProt: P0AEM9 - P0AFT2
Length: 488
Sequences: 4835
Seq/Len: 10.70
I_Prob: 0.00

FLIY - Cystine-binding periplasmic protein
Paralog alert: 0.90 [within 20: 0.42] - ratio of genomes with paralogs
Cluster includes: ARGT ARTI ARTJ FLIY GLNH GLTI HISJ YHDW
YECS - Inner membrane amino-acid ABC transporter permease protein YecS
Paralog alert: 0.93 [within 20: 0.65] - ratio of genomes with paralogs
Cluster includes: ARTM ARTQ GLNP GLTJ GLTK HISM HISQ METI PHNE SSUC TAUC YECS YEHW
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
174_R 87_P 0.74 0.00
155_G 152_S 0.64 0.00
177_D 176_Q 0.63 0.00
100_R 84_E 0.52 0.00
185_D 75_Y 0.51 0.00
85_K 87_P 0.51 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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