| UniProt: | P30860 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11628 | ||
| Length: | 243 (223) | ||
| Sequences: | 10388 | ||
| Seq/Len: | 46.58 |
| ARTJ
Paralog alert: 0.90 [within 20: 0.42] - ratio of genomes with paralogs Cluster includes: ARGT ARTI ARTJ FLIY GLNH GLTI HISJ YHDW |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 130_G | 168_I | 3.825 | 1.00 | |
| 26_G | 81_Y | 3.526 | 1.00 | |
| 22_K | 63_T | 3.364 | 1.00 | |
| 57_Q | 226_A | 3.171 | 1.00 | |
| 102_T | 225_A | 2.553 | 1.00 | |
| 153_Y | 162_D | 2.509 | 1.00 | |
| 90_I | 206_G | 2.417 | 1.00 | |
| 92_P | 95_S | 2.381 | 1.00 | |
| 24_N | 63_T | 2.376 | 1.00 | |
| 232_T | 235_K | 2.361 | 1.00 | |
| 90_I | 95_S | 2.268 | 1.00 | |
| 217_L | 221_N | 2.259 | 1.00 | |
| 234_Q | 238_D | 2.208 | 1.00 | |
| 24_N | 65_T | 2.187 | 1.00 | |
| 75_S | 81_Y | 2.173 | 1.00 | |
| 22_K | 61_E | 2.165 | 1.00 | |
| 55_C | 62_C | 2.108 | 1.00 | |
| 98_V | 208_A | 2.092 | 1.00 | |
| 120_T | 123_D | 2.026 | 1.00 | |
| 138_Q | 152_S | 2.011 | 1.00 | |
| 225_A | 229_A | 2.004 | 1.00 | |
| 53_A | 56_K | 2.002 | 1.00 | |
| 155_S | 158_N | 1.986 | 1.00 | |
| 38_G | 44_V | 1.981 | 1.00 | |
| 138_Q | 142_Q | 1.965 | 1.00 | |
| 209_V | 217_L | 1.945 | 1.00 | |
| 128_R | 151_V | 1.929 | 1.00 | |
| 209_V | 220_L | 1.913 | 1.00 | |
| 53_A | 232_T | 1.886 | 1.00 | |
| 77_K | 97_Q | 1.883 | 1.00 | |
| 102_T | 221_N | 1.865 | 1.00 | |
| 99_S | 217_L | 1.836 | 1.00 | |
| 128_R | 149_K | 1.814 | 1.00 | |
| 173_G | 178_V | 1.793 | 1.00 | |
| 49_D | 239_Q | 1.773 | 1.00 | |
| 210_R | 213_N | 1.764 | 1.00 | |
| 57_Q | 223_A | 1.718 | 1.00 | |
| 53_A | 57_Q | 1.71 | 1.00 | |
| 53_A | 227_I | 1.682 | 1.00 | |
| 101_T | 221_N | 1.678 | 1.00 | |
| 85_I | 207_I | 1.606 | 1.00 | |
| 57_Q | 230_D | 1.599 | 1.00 | |
| 112_I | 178_V | 1.59 | 1.00 | |
| 38_G | 42_E | 1.589 | 1.00 | |
| 99_S | 212_D | 1.574 | 1.00 | |
| 214_K | 218_E | 1.569 | 1.00 | |
| 49_D | 240_W | 1.568 | 1.00 | |
| 218_E | 222_N | 1.543 | 1.00 | |
| 159_A | 171_V | 1.534 | 1.00 | |
| 25_F | 51_A | 1.49 | 1.00 | |
| 75_S | 80_K | 1.436 | 1.00 | |
| 127_K | 169_D | 1.424 | 1.00 | |
| 114_K | 117_T | 1.416 | 1.00 | |
| 114_K | 166_G | 1.382 | 0.99 | |
| 129_I | 170_G | 1.369 | 0.99 | |
| 133_N | 154_D | 1.35 | 0.99 | |
| 93_E | 96_K | 1.332 | 0.99 | |
| 162_D | 167_R | 1.33 | 0.99 | |
| 47_D | 104_Y | 1.329 | 0.99 | |
| 25_F | 83_A | 1.319 | 0.99 | |
| 163_L | 168_I | 1.317 | 0.99 | |
| 219_K | 222_N | 1.316 | 0.99 | |
| 52_K | 64_F | 1.31 | 0.99 | |
| 154_D | 158_N | 1.308 | 0.99 | |
| 115_K | 189_G | 1.307 | 0.99 | |
| 175_T | 179_N | 1.302 | 0.99 | |
| 79_R | 210_R | 1.299 | 0.99 | |
| 58_M | 223_A | 1.297 | 0.99 | |
| 101_T | 220_L | 1.292 | 0.99 | |
| 36_S | 44_V | 1.284 | 0.99 | |
| 116_D | 189_G | 1.282 | 0.99 | |
| 139_K | 143_D | 1.279 | 0.99 | |
| 99_S | 214_K | 1.277 | 0.99 | |
| 111_V | 170_G | 1.272 | 0.99 | |
| 73_I | 98_V | 1.258 | 0.99 | |
| 222_N | 226_A | 1.254 | 0.99 | |
| 54_L | 223_A | 1.251 | 0.99 | |
| 219_K | 223_A | 1.222 | 0.98 | |
| 232_T | 236_I | 1.222 | 0.98 | |
| 72_L | 84_V | 1.222 | 0.98 | |
| 46_F | 236_I | 1.219 | 0.98 | |
| 106_E | 204_G | 1.216 | 0.98 | |
| 132_E | 135_T | 1.215 | 0.98 | |
| 130_G | 153_Y | 1.212 | 0.98 | |
| 67_H | 75_S | 1.195 | 0.98 | |
| 83_A | 220_L | 1.188 | 0.98 | |
| 83_A | 209_V | 1.188 | 0.98 | |
| 128_R | 169_D | 1.185 | 0.98 | |
| 163_L | 171_V | 1.184 | 0.98 | |
| 46_F | 237_S | 1.175 | 0.98 | |
| 42_E | 52_K | 1.175 | 0.98 | |
| 84_V | 88_M | 1.159 | 0.97 | |
| 162_D | 168_I | 1.158 | 0.97 | |
| 223_A | 226_A | 1.145 | 0.97 | |
| 122_A | 125_K | 1.139 | 0.97 | |
| 88_M | 208_A | 1.13 | 0.97 | |
| 46_F | 241_F | 1.127 | 0.97 | |
| 68_A | 71_S | 1.125 | 0.97 | |
| 223_A | 227_I | 1.123 | 0.97 | |
| 130_G | 159_A | 1.121 | 0.97 | |
| 226_A | 230_D | 1.116 | 0.96 | |
| 37_I | 66_N | 1.116 | 0.96 | |
| 25_F | 62_C | 1.112 | 0.96 | |
| 153_Y | 159_A | 1.112 | 0.96 | |
| 140_Y | 144_Q | 1.102 | 0.96 | |
| 228_K | 233_Y | 1.085 | 0.96 | |
| 48_I | 52_K | 1.085 | 0.96 | |
| 50_L | 227_I | 1.082 | 0.96 | |
| 110_V | 190_V | 1.077 | 0.95 | |
| 110_V | 175_T | 1.075 | 0.95 | |
| 108_S | 175_T | 1.069 | 0.95 | |
| 113_A | 191_A | 1.069 | 0.95 | |
| 57_Q | 227_I | 1.065 | 0.95 | |
| 49_D | 52_K | 1.06 | 0.95 | |
| 52_K | 56_K | 1.056 | 0.95 | |
| 142_Q | 152_S | 1.053 | 0.95 | |
| 125_K | 147_E | 1.05 | 0.94 | |
| 91_T | 94_R | 1.04 | 0.94 | |
| 43_I | 48_I | 1.039 | 0.94 | |
| 163_L | 188_L | 1.039 | 0.94 | |
| 50_L | 233_Y | 1.033 | 0.94 | |
| 99_S | 211_P | 1.031 | 0.94 | |
| 51_A | 85_I | 1.028 | 0.94 | |
| 51_A | 64_F | 1.022 | 0.93 | |
| 34_F | 105_Y | 1.013 | 0.93 | |
| 161_I | 165_N | 1.011 | 0.93 | |
| 74_P | 77_K | 1.006 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2yjpA | 3 | 0.9835 | 100 | 0.205 | Contact Map | 0.85 |
| 2y7iA | 2 | 0.9383 | 100 | 0.208 | Contact Map | 0.804 |
| 1xt8A | 2 | 0.9835 | 100 | 0.215 | Contact Map | 0.866 |
| 2ylnA | 1 | 0.9712 | 100 | 0.219 | Contact Map | 0.821 |
| 3h7mA | 1 | 0.9342 | 100 | 0.224 | Contact Map | 0.798 |
| 1lstA | 1 | 0.93 | 100 | 0.226 | Contact Map | 0.833 |
| 3kzgA | 4 | 0.9095 | 100 | 0.227 | Contact Map | 0.879 |
| 4kqpA | 1 | 0.9259 | 100 | 0.228 | Contact Map | 0.8 |
| 3i6vA | 1 | 0.893 | 100 | 0.228 | Contact Map | 0.803 |
| 3k4uA | 6 | 0.9136 | 100 | 0.23 | Contact Map | 0.839 |
Sequence Conservation (Image Generated using WebLogo v3)