| UniProt: | P28304 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11492 | ||
| Length: | 327 (325) | ||
| Sequences: | 22787 | ||
| Seq/Len: | 70.11 |
| QOR1
Paralog alert: 0.83 [within 20: 0.38] - ratio of genomes with paralogs Cluster includes: ACUI ADHP CURA FRMA GATD IDND QOR1 RSPB TDH YAHK YBDR YCJQ YDJJ YDJL YGGP YJGB YJJN YPHC |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 306_D | 309_R | 3.366 | 1.00 | |
| 36_K | 115_F | 3.225 | 1.00 | |
| 34_E | 70_S | 3.092 | 1.00 | |
| 36_K | 68_I | 2.919 | 1.00 | |
| 31_I | 106_A | 2.848 | 1.00 | |
| 32_Q | 70_S | 2.809 | 1.00 | |
| 8_H | 19_V | 2.779 | 1.00 | |
| 114_S | 117_Q | 2.723 | 1.00 | |
| 83_D | 108_I | 2.704 | 1.00 | |
| 162_K | 187_W | 2.691 | 1.00 | |
| 179_Q | 183_K | 2.616 | 1.00 | |
| 143_Q | 167_K | 2.596 | 1.00 | |
| 302_Y | 313_I | 2.564 | 1.00 | |
| 80_K | 83_D | 2.471 | 1.00 | |
| 178_A | 182_L | 2.47 | 1.00 | |
| 116_E | 301_K | 2.452 | 1.00 | |
| 200_R | 203_E | 2.439 | 1.00 | |
| 28_E | 74_S | 2.384 | 1.00 | |
| 34_E | 68_I | 2.365 | 1.00 | |
| 84_R | 109_L | 2.362 | 1.00 | |
| 29_N | 75_G | 2.327 | 1.00 | |
| 34_E | 98_V | 2.277 | 1.00 | |
| 285_S | 289_S | 2.217 | 1.00 | |
| 6_E | 19_V | 2.204 | 1.00 | |
| 144_F | 161_A | 2.199 | 1.00 | |
| 78_H | 103_A | 2.195 | 1.00 | |
| 28_E | 75_G | 2.186 | 1.00 | |
| 167_K | 188_Q | 2.181 | 1.00 | |
| 303_P | 306_D | 2.179 | 1.00 | |
| 23_P | 98_V | 2.142 | 1.00 | |
| 65_A | 94_A | 2.118 | 1.00 | |
| 300_Q | 313_I | 2.101 | 1.00 | |
| 112_A | 288_A | 2.097 | 1.00 | |
| 139_K | 142_E | 2.083 | 1.00 | |
| 8_H | 17_Q | 2.065 | 1.00 | |
| 175_A | 179_Q | 2.039 | 1.00 | |
| 84_R | 115_F | 2.031 | 1.00 | |
| 145_L | 210_V | 2.021 | 1.00 | |
| 25_D | 71_K | 2.006 | 1.00 | |
| 27_A | 30_E | 2.004 | 1.00 | |
| 158_C | 186_A | 1.986 | 1.00 | |
| 309_R | 312_E | 1.932 | 1.00 | |
| 302_Y | 310_A | 1.929 | 1.00 | |
| 142_E | 234_L | 1.929 | 1.00 | |
| 312_E | 316_S | 1.924 | 1.00 | |
| 66_A | 115_F | 1.903 | 1.00 | |
| 32_Q | 100_N | 1.9 | 1.00 | |
| 125_G | 156_I | 1.887 | 1.00 | |
| 229_L | 235_M | 1.873 | 1.00 | |
| 70_S | 98_V | 1.856 | 1.00 | |
| 179_Q | 182_L | 1.855 | 1.00 | |
| 145_L | 171_T | 1.851 | 1.00 | |
| 301_K | 326_I | 1.843 | 1.00 | |
| 149_A | 170_G | 1.839 | 1.00 | |
| 175_A | 191_N | 1.822 | 1.00 | |
| 313_I | 318_A | 1.76 | 1.00 | |
| 109_L | 118_A | 1.737 | 1.00 | |
| 133_R | 164_L | 1.721 | 1.00 | |
| 178_A | 189_V | 1.719 | 1.00 | |
| 3_T | 20_E | 1.711 | 1.00 | |
| 49_S | 315_E | 1.709 | 1.00 | |
| 71_K | 81_A | 1.709 | 1.00 | |
| 172_V | 178_A | 1.694 | 1.00 | |
| 73_G | 76_V | 1.69 | 1.00 | |
| 211_R | 230_Q | 1.686 | 1.00 | |
| 84_R | 111_A | 1.665 | 1.00 | |
| 195_E | 200_R | 1.659 | 1.00 | |
| 79_I | 108_I | 1.652 | 1.00 | |
| 72_V | 81_A | 1.638 | 1.00 | |
| 26_P | 100_N | 1.613 | 1.00 | |
| 229_L | 233_G | 1.604 | 1.00 | |
| 109_L | 115_F | 1.594 | 1.00 | |
| 309_R | 313_I | 1.59 | 1.00 | |
| 169_I | 210_V | 1.584 | 1.00 | |
| 163_A | 291_V | 1.578 | 1.00 | |
| 180_S | 183_K | 1.563 | 1.00 | |
| 147_H | 225_S | 1.56 | 1.00 | |
| 5_I | 307_A | 1.559 | 1.00 | |
| 191_N | 194_E | 1.554 | 1.00 | |
| 196_D | 199_E | 1.553 | 1.00 | |
| 234_L | 260_Y | 1.551 | 1.00 | |
| 175_A | 194_E | 1.548 | 1.00 | |
| 30_E | 102_I | 1.541 | 1.00 | |
| 65_A | 87_Y | 1.534 | 1.00 | |
| 68_I | 84_R | 1.516 | 1.00 | |
| 188_Q | 204_I | 1.511 | 1.00 | |
| 213_V | 225_S | 1.508 | 1.00 | |
| 29_N | 102_I | 1.5 | 1.00 | |
| 69_V | 79_I | 1.484 | 1.00 | |
| 35_N | 65_A | 1.48 | 1.00 | |
| 79_I | 83_D | 1.477 | 1.00 | |
| 32_Q | 98_V | 1.476 | 1.00 | |
| 3_T | 305_K | 1.468 | 1.00 | |
| 95_Y | 311_H | 1.456 | 1.00 | |
| 3_T | 97_S | 1.453 | 1.00 | |
| 32_Q | 71_K | 1.45 | 1.00 | |
| 30_E | 100_N | 1.45 | 1.00 | |
| 136_Y | 212_V | 1.427 | 1.00 | |
| 167_K | 187_W | 1.399 | 0.99 | |
| 31_I | 79_I | 1.392 | 0.99 | |
| 37_A | 116_E | 1.382 | 0.99 | |
| 68_I | 115_F | 1.382 | 0.99 | |
| 158_C | 170_G | 1.37 | 0.99 | |
| 4_R | 21_F | 1.37 | 0.99 | |
| 26_P | 32_Q | 1.349 | 0.99 | |
| 229_L | 259_L | 1.348 | 0.99 | |
| 26_P | 30_E | 1.342 | 0.99 | |
| 308_Q | 312_E | 1.34 | 0.99 | |
| 213_V | 229_L | 1.322 | 0.99 | |
| 157_A | 214_Y | 1.318 | 0.99 | |
| 199_E | 203_E | 1.311 | 0.99 | |
| 285_S | 288_A | 1.307 | 0.99 | |
| 173_G | 192_Y | 1.303 | 0.99 | |
| 143_Q | 169_I | 1.3 | 0.99 | |
| 79_I | 106_A | 1.293 | 0.99 | |
| 256_K | 259_L | 1.291 | 0.99 | |
| 37_A | 326_I | 1.282 | 0.99 | |
| 299_Q | 313_I | 1.281 | 0.99 | |
| 5_I | 18_A | 1.272 | 0.99 | |
| 33_V | 67_G | 1.265 | 0.99 | |
| 117_Q | 293_K | 1.263 | 0.99 | |
| 116_E | 326_I | 1.257 | 0.99 | |
| 147_H | 171_T | 1.255 | 0.99 | |
| 234_L | 262_T | 1.237 | 0.98 | |
| 36_K | 84_R | 1.233 | 0.98 | |
| 101_I | 106_A | 1.216 | 0.98 | |
| 286_L | 291_V | 1.204 | 0.98 | |
| 138_I | 166_A | 1.186 | 0.98 | |
| 175_A | 178_A | 1.182 | 0.98 | |
| 40_I | 310_A | 1.179 | 0.98 | |
| 129_Y | 133_R | 1.173 | 0.98 | |
| 48_R | 311_H | 1.171 | 0.98 | |
| 182_L | 189_V | 1.165 | 0.97 | |
| 29_N | 103_A | 1.162 | 0.97 | |
| 41_N | 63_T | 1.162 | 0.97 | |
| 133_R | 282_E | 1.161 | 0.97 | |
| 37_A | 115_F | 1.141 | 0.97 | |
| 146_F | 157_A | 1.135 | 0.97 | |
| 23_P | 32_Q | 1.134 | 0.97 | |
| 163_A | 286_L | 1.127 | 0.97 | |
| 170_G | 186_A | 1.124 | 0.97 | |
| 143_Q | 211_R | 1.124 | 0.97 | |
| 136_Y | 236_V | 1.119 | 0.96 | |
| 113_I | 118_A | 1.108 | 0.96 | |
| 35_N | 99_H | 1.084 | 0.96 | |
| 200_R | 204_I | 1.074 | 0.95 | |
| 173_G | 193_R | 1.069 | 0.95 | |
| 215_D | 218_G | 1.052 | 0.95 | |
| 18_A | 305_K | 1.043 | 0.94 | |
| 134_K | 275_E | 1.042 | 0.94 | |
| 182_L | 188_Q | 1.038 | 0.94 | |
| 146_F | 161_A | 1.037 | 0.94 | |
| 282_E | 285_S | 1.035 | 0.94 | |
| 312_E | 315_E | 1.03 | 0.94 | |
| 128_V | 160_W | 1.023 | 0.93 | |
| 33_V | 85_V | 1.022 | 0.93 | |
| 142_E | 211_R | 1.021 | 0.93 | |
| 41_N | 64_E | 1.015 | 0.93 | |
| 34_E | 97_S | 1.006 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1qorA | 2 | 1 | 100 | 0.019 | Contact Map | 0.795 |
| 3jynA | 1 | 0.9939 | 100 | 0.025 | Contact Map | 0.766 |
| 1wlyA | 1 | 0.9908 | 100 | 0.046 | Contact Map | 0.747 |
| 4dupA | 2 | 0.9847 | 100 | 0.048 | Contact Map | 0.803 |
| 4eyeA | 2 | 0.9786 | 100 | 0.05 | Contact Map | 0.785 |
| 3qwbA | 4 | 0.9817 | 100 | 0.051 | Contact Map | 0.802 |
| 1yb5A | 2 | 0.9786 | 100 | 0.059 | Contact Map | 0.84 |
| 4j6fA | 2 | 0.9602 | 100 | 0.061 | Contact Map | 0.761 |
| 3uogA | 2 | 0.9572 | 100 | 0.065 | Contact Map | 0.829 |
| 4a27A | 2 | 0.9755 | 100 | 0.066 | Contact Map | 0.841 |
Sequence Conservation (Image Generated using WebLogo v3)