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OPENSEQ.org

UGPE - UGPQ
UniProt: P10906 - P10908
Length: 528
Sequences: 579
Seq/Len: 1.14
I_Prob: 0.00

UGPE - sn-glycerol-3-phosphate transport system permease protein UgpE
Paralog alert: 0.95 [within 20: 0.80] - ratio of genomes with paralogs
Cluster includes: CYST CYSW MALG MODB POTB POTC POTH POTI PSTA PSTC UGPA UGPE YCJO YCJP YDCU YDCV
UGPQ - Glycerophosphoryl diester phosphodiesterase
Paralog alert: 0.70 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: UGPQ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
252_V 26_S 1.12 0.00
169_L 240_I 0.97 0.00
191_I 155_A 0.96 0.00
149_T 97_L 0.94 0.00
177_A 158_Q 0.93 0.00
229_T 237_I 0.92 0.00
90_G 68_A 0.90 0.00
93_T 155_A 0.90 0.00
159_T 145_L 0.88 0.00
175_E 178_E 0.87 0.00
86_S 200_V 0.87 0.00
116_M 188_I 0.84 0.00
134_E 11_A 0.83 0.00
102_I 130_A 0.83 0.00
92_I 178_E 0.83 0.00
176_A 145_L 0.82 0.00
270_R 182_R 0.81 0.00
197_K 62_S 0.81 0.00
248_N 58_L 0.81 0.00
176_A 92_E 0.80 0.00
21_A 109_M 0.80 0.00
77_L 133_A 0.80 0.00
55_L 127_K 0.80 0.00
189_C 153_L 0.80 0.00
177_A 212_V 0.79 0.00
43_A 26_S 0.79 0.00
70_S 40_F 0.79 0.00
179_I 45_S 0.79 0.00
113_F 94_L 0.78 0.00
256_L 19_A 0.78 0.00
88_T 36_K 0.78 0.00
200_L 9_I 0.77 0.00
130_F 127_K 0.77 0.00
92_I 62_S 0.77 0.00
255_L 97_L 0.76 0.00
269_Q 51_F 0.76 0.00
263_V 65_W 0.76 0.00
190_D 198_A 0.76 0.00
26_P 147_S 0.76 0.00
191_I 106_E 0.75 0.00
135_V 180_T 0.75 0.00
177_A 167_L 0.75 0.00
19_G 224_L 0.74 0.00
175_E 11_A 0.74 0.00
120_T 215_V 0.74 0.00
96_M 45_S 0.74 0.00
161_L 51_F 0.73 0.00
255_L 115_I 0.73 0.00
148_L 112_N 0.72 0.00
121_L 76_L 0.72 0.00
258_L 100_V 0.72 0.00
255_L 28_D 0.72 0.00
185_M 200_V 0.72 0.00
221_I 58_L 0.72 0.00
27_L 133_A 0.71 0.00
176_A 234_T 0.71 0.00
208_F 112_N 0.70 0.00
24_L 31_A 0.70 0.00
169_L 195_L 0.70 0.00
209_I 202_Q 0.70 0.00
151_P 61_T 0.70 0.00
62_W 141_T 0.70 0.00
264_I 79_V 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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