May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

MIOC - XERC
UniProt: P03817 - P0A8P6
Length: 445
Sequences: 274
Seq/Len: 0.63
I_Prob: 0.00

MIOC - Protein MioC
Paralog alert: 0.55 [within 20: 0.04] - ratio of genomes with paralogs
Cluster includes: FLAV FLAW MIOC YQCA
XERC - Tyrosine recombinase XerC
Paralog alert: 0.88 [within 20: 0.25] - ratio of genomes with paralogs
Cluster includes: FIMB FIME INTA INTB INTD INTE INTF INTQ INTR INTS INTZ XERC XERD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
117_T 128_N 1.20 0.00
48_G 160_L 1.16 0.00
98_F 181_I 1.15 0.00
62_I 71_A 1.13 0.00
110_K 229_I 1.06 0.00
32_T 284_A 1.05 0.00
32_T 121_R 1.03 0.00
46_A 284_A 1.02 0.00
18_V 44_G 1.01 0.00
8_S 156_D 1.00 0.00
98_F 15_L 1.00 0.00
98_F 40_A 0.99 0.00
98_F 67_G 0.97 0.00
87_A 145_A 0.96 0.00
90_I 60_A 0.93 0.00
85_F 92_E 0.93 0.00
108_E 59_F 0.93 0.00
69_F 83_F 0.93 0.00
42_E 157_I 0.92 0.00
45_P 67_G 0.92 0.00
107_A 294_A 0.92 0.00
26_L 229_I 0.90 0.00
42_E 126_D 0.90 0.00
55_S 158_K 0.90 0.00
94_E 294_A 0.89 0.00
33_T 67_G 0.88 0.00
73_L 181_I 0.88 0.00
102_I 187_A 0.88 0.00
38_G 67_G 0.88 0.00
98_F 76_R 0.86 0.00
98_F 61_V 0.85 0.00
36_L 118_D 0.85 0.00
11_T 181_I 0.85 0.00
71_E 160_L 0.84 0.00
39_P 121_R 0.84 0.00
67_S 145_A 0.83 0.00
36_L 98_A 0.83 0.00
115_K 126_D 0.83 0.00
79_D 118_D 0.82 0.00
55_S 154_G 0.82 0.00
49_I 17_V 0.82 0.00
50_W 189_I 0.82 0.00
8_S 186_V 0.82 0.00
81_S 202_E 0.82 0.00
32_T 45_L 0.81 0.00
45_P 159_H 0.81 0.00
43_D 80_L 0.81 0.00
61_D 69_G 0.81 0.00
52_V 150_S 0.80 0.00
49_I 141_V 0.80 0.00
96_D 56_V 0.80 0.00
114_A 55_M 0.80 0.00
114_A 286_V 0.80 0.00
88_I 62_R 0.80 0.00
43_D 121_R 0.80 0.00
45_P 62_R 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.1028 seconds.