May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
YAFP - YAFV
UniProt: Q47158 - Q47679
Length: 406
Sequences: 503
Seq/Len: 1.27
I_Prob: 0.00
YAFP - Uncharacterized N-acetyltransferase YafP
Paralog alert: 0.87 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: ATDA PHNO RIMI RIMJ RIML YAFP YEDL YHHY YIAC YJAB YJGM YNCA YPEA 		YAFV - UPF0012 hydrolase YafV
Paralog alert: 0.77 [within 20: 0.06] - ratio of genomes with paralogs
Cluster includes: YAFV YBEM YOBB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
15_Q 17_D 1.17 0.00
89_R 218_A 1.16 0.00
97_L 35_R 1.12 0.00
67_P 158_L 1.11 0.00
68_V 217_I 1.04 0.00
89_R 210_I 1.01 0.00
83_V 160_L 0.96 0.00
60_V 65_W 0.94 0.00
6_I 219_T 0.92 0.00
8_N 74_N 0.90 0.00
93_A 48_F 0.89 0.00
89_R 228_I 0.88 0.00
24_A 69_K 0.87 0.00
86_E 23_R 0.86 0.00
135_R 77_I 0.86 0.00
114_T 228_I 0.85 0.00
93_A 19_P 0.85 0.00
64_N 136_I 0.84 0.00
86_E 189_A 0.83 0.00
83_V 6_I 0.82 0.00
61_A 13_L 0.82 0.00
83_V 101_T 0.82 0.00
49_W 7_T 0.81 0.00
136_G 147_P 0.81 0.00
9_Y 211_N 0.79 0.00
15_Q 67_T 0.78 0.00
88_T 5_K 0.78 0.00
20_I 29_L 0.77 0.00
97_L 22_L 0.76 0.00
118_F 128_I 0.76 0.00
10_Q 74_N 0.75 0.00
112_S 157_D 0.75 0.00
134_C 37_V 0.74 0.00
120_E 102_V 0.74 0.00
19_A 23_R 0.73 0.00
124_F 40_L 0.73 0.00
62_I 209_V 0.73 0.00
65_A 62_V 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 0.2098 seconds.