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OPENSEQ.org

COHE - INTE
UniProt: P75974 - P75969
Length: 599
Sequences: 501
Seq/Len: 0.89
I_Prob: 0.00

COHE - Putative lambdoid prophage e14 repressor protein C2
Paralog alert: 0.43 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: COHE LEXA UMUD
INTE - Prophage lambda integrase
Paralog alert: 0.72 [within 20: 0.09] - ratio of genomes with paralogs
Cluster includes: FIMB FIME INTA INTB INTD INTE INTF INTQ INTR INTS INTZ XERC XERD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
164_I 283_A 0.83 0.00
208_I 106_L 0.79 0.00
94_V 163_F 0.78 0.00
29_I 271_D 0.75 0.00
212_I 243_L 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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