| UniProt: | P0A7C2 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10533 | ||
| Length: | 202 (197) | ||
| Sequences: | 2510 | ||
| Seq/Len: | 12.74 |
| LEXA
Paralog alert: 0.41 [within 20: 0.01] - ratio of genomes with paralogs Cluster includes: COHE LEXA UMUD |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 157_R | 170_E | 4.09 | 1.00 | |
| 19_I | 47_L | 3.59 | 1.00 | |
| 118_M | 174_F | 3.256 | 1.00 | |
| 82_V | 146_V | 3.007 | 1.00 | |
| 84_A | 115_V | 2.967 | 1.00 | |
| 131_L | 155_V | 2.659 | 1.00 | |
| 164_K | 178_V | 2.534 | 1.00 | |
| 18_H | 22_T | 2.511 | 1.00 | |
| 126_M | 129_D | 2.327 | 1.00 | |
| 122_D | 172_S | 2.266 | 1.00 | |
| 11_V | 15_I | 2.143 | 1.00 | |
| 161_Q | 166_E | 1.943 | 1.00 | |
| 143_Q | 191_L | 1.917 | 1.00 | |
| 9_Q | 13_D | 1.901 | 1.00 | |
| 112_L | 130_L | 1.879 | 1.00 | |
| 76_L | 112_L | 1.878 | 1.00 | |
| 112_L | 132_A | 1.866 | 1.00 | |
| 159_K | 168_L | 1.832 | 1.00 | |
| 159_K | 166_E | 1.795 | 1.00 | |
| 133_V | 192_A | 1.786 | 1.00 | |
| 29_A | 40_P | 1.698 | 1.00 | |
| 139_V | 145_V | 1.682 | 1.00 | |
| 155_V | 192_A | 1.671 | 1.00 | |
| 124_G | 170_E | 1.668 | 1.00 | |
| 118_M | 173_E | 1.654 | 1.00 | |
| 81_R | 116_S | 1.643 | 1.00 | |
| 154_T | 169_P | 1.638 | 1.00 | |
| 168_L | 176_P | 1.635 | 1.00 | |
| 125_I | 144_V | 1.62 | 1.00 | |
| 109_A | 135_K | 1.583 | 1.00 | |
| 114_R | 130_L | 1.558 | 1.00 | |
| 133_V | 146_V | 1.531 | 1.00 | |
| 129_D | 197_R | 1.524 | 1.00 | |
| 150_D | 185_S | 1.499 | 1.00 | |
| 29_A | 33_Q | 1.496 | 1.00 | |
| 31_I | 43_A | 1.488 | 1.00 | |
| 83_A | 87_P | 1.452 | 1.00 | |
| 37_F | 43_A | 1.437 | 1.00 | |
| 63_S | 68_L | 1.406 | 0.99 | |
| 35_L | 65_G | 1.395 | 0.99 | |
| 115_V | 131_L | 1.393 | 0.99 | |
| 37_F | 42_A | 1.386 | 0.99 | |
| 18_H | 21_Q | 1.386 | 0.99 | |
| 123_I | 170_E | 1.381 | 0.99 | |
| 85_G | 156_K | 1.362 | 0.99 | |
| 32_A | 40_P | 1.34 | 0.99 | |
| 32_A | 35_L | 1.328 | 0.99 | |
| 85_G | 117_G | 1.323 | 0.99 | |
| 115_V | 155_V | 1.319 | 0.99 | |
| 28_R | 40_P | 1.316 | 0.99 | |
| 12_F | 47_L | 1.313 | 0.99 | |
| 119_S | 156_K | 1.307 | 0.99 | |
| 17_D | 21_Q | 1.285 | 0.99 | |
| 12_F | 19_I | 1.283 | 0.99 | |
| 144_V | 157_R | 1.261 | 0.99 | |
| 145_V | 158_L | 1.251 | 0.99 | |
| 30_E | 34_R | 1.243 | 0.98 | |
| 82_V | 113_L | 1.233 | 0.98 | |
| 148_R | 187_T | 1.232 | 0.98 | |
| 42_A | 45_E | 1.222 | 0.98 | |
| 13_D | 17_D | 1.221 | 0.98 | |
| 147_A | 158_L | 1.214 | 0.98 | |
| 43_A | 46_H | 1.2 | 0.98 | |
| 56_I | 66_I | 1.197 | 0.98 | |
| 146_V | 155_V | 1.19 | 0.98 | |
| 5_T | 8_Q | 1.187 | 0.98 | |
| 148_R | 189_E | 1.186 | 0.98 | |
| 98_Y | 112_L | 1.183 | 0.98 | |
| 41_N | 44_E | 1.18 | 0.98 | |
| 14_L | 18_H | 1.179 | 0.98 | |
| 133_V | 155_V | 1.176 | 0.98 | |
| 51_A | 58_I | 1.175 | 0.98 | |
| 28_R | 47_L | 1.173 | 0.98 | |
| 75_G | 99_Q | 1.164 | 0.97 | |
| 115_V | 125_I | 1.164 | 0.97 | |
| 164_K | 180_D | 1.163 | 0.97 | |
| 76_L | 110_D | 1.155 | 0.97 | |
| 45_E | 50_L | 1.154 | 0.97 | |
| 82_V | 155_V | 1.122 | 0.97 | |
| 78_L | 96_G | 1.118 | 0.96 | |
| 40_P | 44_E | 1.084 | 0.96 | |
| 117_G | 127_D | 1.082 | 0.96 | |
| 57_E | 67_R | 1.082 | 0.96 | |
| 125_I | 195_V | 1.078 | 0.95 | |
| 16_R | 47_L | 1.068 | 0.95 | |
| 111_F | 135_K | 1.064 | 0.95 | |
| 44_E | 48_K | 1.056 | 0.95 | |
| 147_A | 167_L | 1.056 | 0.95 | |
| 78_L | 98_Y | 1.054 | 0.95 | |
| 131_L | 192_A | 1.047 | 0.94 | |
| 122_D | 170_E | 1.044 | 0.94 | |
| 28_R | 44_E | 1.024 | 0.93 | |
| 157_R | 168_L | 1.019 | 0.93 | |
| 167_L | 177_I | 1.018 | 0.93 | |
| 166_E | 176_P | 1.009 | 0.93 | |
| 113_L | 153_V | 1.006 | 0.93 | |
| 87_P | 154_T | 1.003 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1jhfA | 2 | 1 | 100 | 0.22 | Contact Map | 0.671 |
| 3bdnA | 2 | 0.9505 | 100 | 0.266 | Contact Map | 0.635 |
| 3k2zA | 2 | 0.9653 | 100 | 0.295 | Contact Map | 0.71 |
| 2fjrA | 2 | 0.8416 | 100 | 0.411 | Contact Map | 0.533 |
| 1umuA | 2 | 0.5644 | 99.9 | 0.512 | Contact Map | 0.793 |
| 2hnfA | 1 | 0.5891 | 99.9 | 0.514 | Contact Map | 0.713 |
| 1kcaA | 8 | 0.5 | 99.8 | 0.566 | Contact Map | 0.885 |
| 2bnmA | 2 | 0.8564 | 99.7 | 0.62 | Contact Map | 0.348 |
| 1dw9A | 10 | 0.6881 | 99.4 | 0.686 | Contact Map | 0.412 |
| 4me8A | 1 | 0.4406 | 98.8 | 0.754 | Contact Map | 0.669 |
Sequence Conservation (Image Generated using WebLogo v3)