May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

OSMF - YEHW
UniProt: P33362 - P33359
Length: 548
Sequences: 551
Seq/Len: 1.09
I_Prob: 0.02

OSMF - Putative osmoprotectant uptake system substrate-binding protein OsmF
Paralog alert: 0.33 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: OSMF
YEHW - Putative osmoprotectant uptake system permease protein YehW
Paralog alert: 0.86 [within 20: 0.44] - ratio of genomes with paralogs
Cluster includes: ARTM ARTQ GLNP GLTJ GLTK HISM HISQ METI PHNE SSUC TAUC YECS YEHW
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
279_L 137_L 1.45 0.02
230_L 123_L 1.20 0.01
274_K 71_A 1.16 0.01
218_A 146_E 1.16 0.01
47_V 68_G 1.12 0.01
255_R 119_I 1.03 0.01
39_L 149_K 1.03 0.01
225_V 72_G 1.00 0.01
101_A 143_S 0.99 0.01
33_I 206_S 0.98 0.01
220_G 183_I 0.97 0.01
71_I 133_T 0.94 0.00
234_S 222_L 0.93 0.00
268_F 46_F 0.93 0.00
219_Y 120_A 0.90 0.00
146_S 65_V 0.90 0.00
144_L 58_G 0.90 0.00
128_N 212_Y 0.88 0.00
229_G 66_I 0.88 0.00
68_R 137_L 0.88 0.00
86_G 184_G 0.88 0.00
27_V 188_I 0.87 0.00
36_E 116_P 0.87 0.00
217_M 75_V 0.87 0.00
219_Y 96_T 0.86 0.00
27_V 170_V 0.86 0.00
152_R 129_V 0.86 0.00
261_A 175_V 0.86 0.00
137_D 142_A 0.85 0.00
83_T 113_G 0.84 0.00
44_I 127_L 0.84 0.00
131_T 93_V 0.84 0.00
37_G 215_Q 0.84 0.00
126_A 235_V 0.84 0.00
147_L 154_S 0.83 0.00
35_T 216_G 0.83 0.00
276_L 235_V 0.82 0.00
56_V 86_L 0.82 0.00
55_T 62_L 0.82 0.00
282_S 146_E 0.82 0.00
186_L 60_S 0.81 0.00
147_L 183_I 0.81 0.00
304_T 192_V 0.81 0.00
278_Q 234_L 0.81 0.00
27_V 93_V 0.81 0.00
267_V 234_L 0.81 0.00
301_K 175_V 0.81 0.00
293_V 150_G 0.81 0.00
118_L 56_L 0.80 0.00
229_G 226_I 0.80 0.00
167_E 105_I 0.80 0.00
211_S 139_A 0.80 0.00
39_L 129_V 0.80 0.00
39_L 166_L 0.79 0.00
83_T 111_G 0.79 0.00
274_K 50_A 0.79 0.00
284_A 132_A 0.79 0.00
177_A 218_L 0.78 0.00
229_G 175_V 0.78 0.00
102_Q 90_I 0.78 0.00
261_A 87_V 0.78 0.00
174_A 200_P 0.77 0.00
291_K 231_F 0.77 0.00
179_E 183_I 0.77 0.00
53_V 240_Q 0.76 0.00
271_L 127_L 0.76 0.00
83_T 175_V 0.76 0.00
111_L 122_I 0.76 0.00
168_F 72_G 0.76 0.00
74_G 74_A 0.76 0.00
41_G 167_A 0.76 0.00
128_N 184_G 0.76 0.00
282_S 66_I 0.76 0.00
288_L 115_Q 0.75 0.00
205_A 113_G 0.75 0.00
36_E 128_P 0.75 0.00
110_K 234_L 0.74 0.00
249_V 206_S 0.74 0.00
288_L 208_F 0.74 0.00
218_A 101_A 0.74 0.00
148_A 89_T 0.74 0.00
219_Y 111_G 0.74 0.00
122_T 164_L 0.73 0.00
105_Y 148_A 0.73 0.00
184_F 146_E 0.73 0.00
293_V 186_A 0.73 0.00
286_E 135_A 0.73 0.00
78_I 183_I 0.73 0.00
147_L 105_I 0.73 0.00
225_V 146_E 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0142 seconds.