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OPENSEQ.org

UBIG - YFAE
UniProt: P17993 - P0ABW3
Length: 324
Sequences: 202
Seq/Len: 0.65
I_Prob: 0.00

UBIG - 3-demethylubiquinone-9 3-methyltransferase
Paralog alert: 0.71 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: BIOC CMOA SMTA TAM TEHB UBIE UBIG YAFE YJHP
YFAE - Uncharacterized ferredoxin-like protein YfaE
Paralog alert: 0.79 [within 20: 0.06] - ratio of genomes with paralogs
Cluster includes: YFAE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
183_K 82_I 1.29 0.00
219_I 30_N 1.28 0.00
137_D 82_I 1.24 0.00
236_H 34_E 1.21 0.00
180_M 63_F 1.18 0.00
121_G 43_G 1.16 0.00
59_K 21_S 1.15 0.00
207_K 82_I 1.14 0.00
122_Q 78_G 1.13 0.00
181_V 49_L 1.12 0.00
201_V 76_A 1.10 0.00
203_Q 51_A 1.06 0.00
214_L 39_E 1.05 0.00
176_Y 44_S 1.01 0.00
132_L 61_L 1.00 0.00
234_M 6_L 1.00 0.00
148_L 39_E 0.96 0.00
229_V 78_G 0.96 0.00
57_G 83_E 0.94 0.00
201_V 73_C 0.93 0.00
80_T 82_I 0.93 0.00
61_L 24_A 0.92 0.00
229_V 34_E 0.91 0.00
171_V 44_S 0.91 0.00
109_Q 67_G 0.88 0.00
206_L 56_W 0.87 0.00
87_G 34_E 0.87 0.00
193_K 83_E 0.87 0.00
112_V 15_C 0.86 0.00
239_N 21_S 0.86 0.00
60_V 22_L 0.86 0.00
71_A 50_V 0.86 0.00
149_V 78_G 0.85 0.00
99_L 22_L 0.84 0.00
235_L 83_E 0.84 0.00
105_V 50_V 0.84 0.00
53_G 53_Q 0.83 0.00
198_L 13_L 0.83 0.00
125_V 25_A 0.83 0.00
221_N 80_I 0.83 0.00
95_K 71_P 0.83 0.00
123_Y 67_G 0.82 0.00
121_G 4_V 0.82 0.00
153_G 74_C 0.82 0.00
63_V 51_A 0.82 0.00
137_D 34_E 0.81 0.00
155_V 22_L 0.81 0.00
109_Q 41_Y 0.81 0.00
90_P 34_E 0.81 0.00
71_A 3_R 0.81 0.00
121_G 22_L 0.81 0.00
168_L 67_G 0.81 0.00
141_V 47_T 0.81 0.00
112_V 20_P 0.80 0.00
200_W 80_I 0.80 0.00
163_N 74_C 0.80 0.00
123_Y 51_A 0.80 0.00
189_K 21_S 0.79 0.00
193_K 79_D 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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