| UniProt: | P0A887 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11473 | ||
| Length: | 251 (233) | ||
| Sequences: | 4268 | ||
| Seq/Len: | 18.32 |
| UBIE
Paralog alert: 0.62 [within 20: 0.02] - ratio of genomes with paralogs Cluster includes: BIOC CMOA SMTA TAM TEHB UBIE UBIG YAFE YJHP |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 157_Y | 230_F | 3.257 | 1.00 | |
| 94_A | 122_A | 3.057 | 1.00 | |
| 66_T | 90_K | 3.053 | 1.00 | |
| 150_D | 227_D | 2.983 | 1.00 | |
| 98_E | 121_Q | 2.963 | 1.00 | |
| 217_D | 220_T | 2.817 | 1.00 | |
| 71_A | 142_G | 2.698 | 1.00 | |
| 129_F | 134_F | 2.677 | 1.00 | |
| 30_H | 99_S | 2.67 | 1.00 | |
| 160_L | 166_L | 2.553 | 1.00 | |
| 90_K | 118_E | 2.537 | 1.00 | |
| 155_S | 158_R | 2.524 | 1.00 | |
| 68_L | 134_F | 2.499 | 1.00 | |
| 98_E | 102_K | 2.45 | 1.00 | |
| 72_G | 93_L | 2.395 | 1.00 | |
| 92_V | 134_F | 2.341 | 1.00 | |
| 156_M | 166_L | 2.329 | 1.00 | |
| 160_L | 164_G | 2.319 | 1.00 | |
| 222_K | 226_Q | 2.299 | 1.00 | |
| 150_D | 154_R | 2.289 | 1.00 | |
| 135_D | 161_K | 2.221 | 1.00 | |
| 103_M | 106_E | 2.127 | 1.00 | |
| 102_K | 105_R | 2.088 | 1.00 | |
| 150_D | 224_M | 2.072 | 1.00 | |
| 54_F | 236_Y | 2.062 | 1.00 | |
| 101_L | 121_Q | 2.033 | 1.00 | |
| 160_L | 230_F | 2.013 | 1.00 | |
| 30_H | 97_N | 1.921 | 1.00 | |
| 218_Q | 237_N | 1.911 | 1.00 | |
| 122_A | 128_P | 1.892 | 1.00 | |
| 149_K | 224_M | 1.842 | 1.00 | |
| 72_G | 78_T | 1.757 | 1.00 | |
| 78_T | 91_V | 1.746 | 1.00 | |
| 148_D | 151_K | 1.746 | 1.00 | |
| 223_A | 227_D | 1.683 | 1.00 | |
| 225_M | 248_G | 1.681 | 1.00 | |
| 108_L | 119_Y | 1.658 | 1.00 | |
| 137_I | 156_M | 1.651 | 1.00 | |
| 96_I | 123_N | 1.649 | 1.00 | |
| 104_G | 119_Y | 1.634 | 1.00 | |
| 223_A | 226_Q | 1.628 | 1.00 | |
| 146_V | 152_A | 1.618 | 1.00 | |
| 131_D | 158_R | 1.603 | 1.00 | |
| 130_P | 133_T | 1.601 | 1.00 | |
| 70_L | 156_M | 1.599 | 1.00 | |
| 67_V | 81_F | 1.58 | 1.00 | |
| 83_R | 111_I | 1.567 | 1.00 | |
| 66_T | 92_V | 1.566 | 1.00 | |
| 157_Y | 250_K | 1.561 | 1.00 | |
| 71_A | 139_I | 1.543 | 1.00 | |
| 93_L | 119_Y | 1.528 | 1.00 | |
| 37_D | 74_T | 1.499 | 1.00 | |
| 151_K | 154_R | 1.497 | 1.00 | |
| 59_S | 136_C | 1.489 | 1.00 | |
| 22_A | 123_N | 1.488 | 1.00 | |
| 137_I | 160_L | 1.465 | 1.00 | |
| 155_S | 159_V | 1.462 | 1.00 | |
| 123_N | 126_A | 1.456 | 1.00 | |
| 37_D | 107_K | 1.451 | 1.00 | |
| 94_A | 120_V | 1.417 | 1.00 | |
| 92_V | 120_V | 1.408 | 1.00 | |
| 58_C | 236_Y | 1.338 | 0.99 | |
| 86_G | 89_G | 1.314 | 0.99 | |
| 166_L | 225_M | 1.308 | 0.99 | |
| 101_L | 104_G | 1.3 | 0.99 | |
| 150_D | 228_A | 1.294 | 0.99 | |
| 125_E | 148_D | 1.293 | 0.99 | |
| 57_D | 84_L | 1.287 | 0.99 | |
| 78_T | 117_V | 1.287 | 0.99 | |
| 132_N | 250_K | 1.279 | 0.99 | |
| 97_N | 100_M | 1.277 | 0.99 | |
| 75_G | 104_G | 1.276 | 0.99 | |
| 55_T | 167_L | 1.271 | 0.99 | |
| 62_R | 65_Q | 1.269 | 0.99 | |
| 79_A | 108_L | 1.266 | 0.99 | |
| 105_R | 109_R | 1.255 | 0.99 | |
| 85_V | 89_G | 1.223 | 0.98 | |
| 154_R | 227_D | 1.219 | 0.98 | |
| 92_V | 129_F | 1.192 | 0.98 | |
| 143_L | 153_L | 1.19 | 0.98 | |
| 70_L | 124_A | 1.162 | 0.97 | |
| 66_T | 134_F | 1.154 | 0.97 | |
| 92_V | 118_E | 1.141 | 0.97 | |
| 42_L | 198_V | 1.139 | 0.97 | |
| 75_G | 119_Y | 1.132 | 0.97 | |
| 143_L | 221_L | 1.111 | 0.96 | |
| 79_A | 111_I | 1.109 | 0.96 | |
| 196_S | 202_A | 1.106 | 0.96 | |
| 127_L | 159_V | 1.099 | 0.96 | |
| 41_D | 49_R | 1.095 | 0.96 | |
| 78_T | 93_L | 1.082 | 0.96 | |
| 18_K | 148_D | 1.08 | 0.95 | |
| 20_Q | 24_M | 1.074 | 0.95 | |
| 101_L | 119_Y | 1.074 | 0.95 | |
| 74_T | 107_K | 1.072 | 0.95 | |
| 41_D | 48_H | 1.068 | 0.95 | |
| 239_T | 242_V | 1.066 | 0.95 | |
| 30_H | 98_E | 1.058 | 0.95 | |
| 144_R | 170_E | 1.058 | 0.95 | |
| 106_E | 110_N | 1.055 | 0.95 | |
| 54_F | 58_C | 1.05 | 0.94 | |
| 80_K | 84_L | 1.049 | 0.94 | |
| 128_P | 155_S | 1.045 | 0.94 | |
| 124_A | 146_V | 1.045 | 0.94 | |
| 67_V | 91_V | 1.044 | 0.94 | |
| 20_Q | 23_D | 1.031 | 0.94 | |
| 24_M | 27_H | 1.025 | 0.93 | |
| 69_D | 93_L | 1.021 | 0.93 | |
| 55_T | 77_L | 1.019 | 0.93 | |
| 126_A | 151_K | 1.013 | 0.93 | |
| 113_V | 117_V | 1.008 | 0.93 | |
| 179_L | 182_A | 1.007 | 0.93 | |
| 131_D | 155_S | 1.002 | 0.92 | |
| 185_A | 189_H | 1 | 0.92 | |
| 82_S | 116_N | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3dtnA | 2 | 0.8845 | 100 | 0.499 | Contact Map | 0.738 |
| 3bkxA | 2 | 0.8725 | 100 | 0.509 | Contact Map | 0.556 |
| 2o57A | 4 | 0.8964 | 100 | 0.511 | Contact Map | 0.805 |
| 1y8cA | 1 | 0.8606 | 100 | 0.515 | Contact Map | 0.729 |
| 4gekA | 2 | 0.9602 | 100 | 0.524 | Contact Map | 0.792 |
| 3busA | 2 | 0.8486 | 100 | 0.526 | Contact Map | 0.772 |
| 3bxoA | 2 | 0.8526 | 100 | 0.528 | Contact Map | 0.731 |
| 1vl5A | 4 | 0.8088 | 100 | 0.53 | Contact Map | 0.812 |
| 3vc1A | 12 | 0.9044 | 100 | 0.53 | Contact Map | 0.822 |
| 4hgzA | 6 | 0.9641 | 100 | 0.534 | Contact Map | 0.79 |
Sequence Conservation (Image Generated using WebLogo v3)