| UniProt: | P0ABW3 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12360 | ||
| Length: | 84 (82) | ||
| Sequences: | 3253 | ||
| Seq/Len: | 39.67 |
| YFAE
Paralog alert: 0.79 [within 20: 0.06] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 20_P | 28_S | 3.683 | 1.00 | |
| 53_Q | 77_K | 3.126 | 1.00 | |
| 47_T | 71_P | 2.742 | 1.00 | |
| 23_L | 35_Y | 2.706 | 1.00 | |
| 51_A | 81_E | 2.541 | 1.00 | |
| 27_E | 38_R | 2.44 | 1.00 | |
| 3_R | 14_L | 2.431 | 1.00 | |
| 17_D | 20_P | 2.179 | 1.00 | |
| 49_L | 69_I | 2.128 | 1.00 | |
| 61_L | 65_Q | 1.891 | 1.00 | |
| 55_D | 77_K | 1.757 | 1.00 | |
| 48_R | 68_E | 1.732 | 1.00 | |
| 27_E | 35_Y | 1.671 | 1.00 | |
| 3_R | 12_Q | 1.596 | 1.00 | |
| 26_L | 33_V | 1.576 | 1.00 | |
| 5_T | 12_Q | 1.511 | 1.00 | |
| 50_V | 83_E | 1.44 | 1.00 | |
| 53_Q | 78_G | 1.391 | 0.99 | |
| 24_A | 38_R | 1.368 | 0.99 | |
| 22_L | 69_I | 1.363 | 0.99 | |
| 46_R | 68_E | 1.318 | 0.99 | |
| 46_R | 70_L | 1.304 | 0.99 | |
| 57_I | 75_R | 1.297 | 0.99 | |
| 5_T | 81_E | 1.28 | 0.99 | |
| 49_L | 54_V | 1.262 | 0.99 | |
| 5_T | 10_G | 1.231 | 0.98 | |
| 20_P | 25_A | 1.181 | 0.98 | |
| 7_R | 81_E | 1.178 | 0.98 | |
| 22_L | 71_P | 1.137 | 0.97 | |
| 55_D | 75_R | 1.136 | 0.97 | |
| 50_V | 81_E | 1.135 | 0.97 | |
| 35_Y | 38_R | 1.13 | 0.97 | |
| 4_V | 22_L | 1.119 | 0.96 | |
| 13_L | 25_A | 1.102 | 0.96 | |
| 33_V | 71_P | 1.096 | 0.96 | |
| 56_W | 74_C | 1.093 | 0.96 | |
| 8_I | 83_E | 1.09 | 0.96 | |
| 46_R | 63_F | 1.067 | 0.95 | |
| 25_A | 29_H | 1.06 | 0.95 | |
| 54_V | 74_C | 1.035 | 0.94 | |
| 48_R | 83_E | 1.033 | 0.94 | |
| 36_Q | 44_S | 1.026 | 0.94 | |
| 36_Q | 39_E | 1.021 | 0.93 | |
| 54_V | 80_I | 1.011 | 0.93 | |
| 3_R | 79_D | 1.004 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3zyyX | 2 | 0.9881 | 99.8 | 0.176 | Contact Map | 0.636 |
| 2piaA | 1 | 0.9762 | 99.8 | 0.204 | Contact Map | 0.898 |
| 1iueA | 2 | 0.9881 | 99.8 | 0.239 | Contact Map | 0.872 |
| 1jq4A | 1 | 0.9881 | 99.8 | 0.239 | Contact Map | 0.466 |
| 1frrA | 2 | 0.9881 | 99.8 | 0.24 | Contact Map | 0.907 |
| 3wcqA | 1 | 0.9881 | 99.8 | 0.241 | Contact Map | 0.866 |
| 1qoaA | 2 | 0.9881 | 99.8 | 0.244 | Contact Map | 0.889 |
| 1wriA | 1 | 0.9762 | 99.8 | 0.246 | Contact Map | 0.767 |
| 1frdA | 1 | 0.9881 | 99.8 | 0.246 | Contact Map | 0.857 |
| 1a70A | 1 | 0.9881 | 99.7 | 0.248 | Contact Map | 0.841 |
Sequence Conservation (Image Generated using WebLogo v3)