May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

BIOC - BIOF
UniProt: P12999 - P12998
Length: 635
Sequences: 483
Seq/Len: 0.77
I_Prob: 0.01

BIOC - Malonyl-CoA O-methyltransferase BioC
Paralog alert: 0.46 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: BIOC CMOA SMTA TAM TEHB UBIE UBIG YAFE YJHP
BIOF - 8-amino-7-oxononanoate synthase
Paralog alert: 0.62 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: BIOF KBL
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
38_L 142_L 1.58 0.01
145_S 175_E 1.33 0.01
106_L 34_L 1.23 0.01
43_Y 318_S 1.21 0.01
197_A 235_G 1.18 0.00
239_L 132_S 1.18 0.00
239_L 175_E 1.13 0.00
191_F 325_V 1.09 0.00
9_I 174_T 1.07 0.00
193_D 66_A 1.06 0.00
239_L 128_A 1.04 0.00
230_W 109_F 1.03 0.00
49_A 257_Q 1.03 0.00
81_R 331_A 1.02 0.00
31_A 176_G 1.02 0.00
113_V 328_N 1.02 0.00
131_R 130_R 1.01 0.00
27_Q 149_R 1.01 0.00
145_S 110_A 1.01 0.00
94_I 363_T 0.99 0.00
140_T 292_R 0.99 0.00
23_H 225_V 0.99 0.00
9_I 186_P 0.98 0.00
149_L 110_A 0.98 0.00
110_N 302_F 0.97 0.00
21_E 11_L 0.97 0.00
153_W 230_L 0.96 0.00
51_C 365_T 0.96 0.00
242_H 267_S 0.96 0.00
206_A 79_V 0.96 0.00
149_L 260_R 0.96 0.00
197_A 97_L 0.96 0.00
193_D 128_A 0.96 0.00
235_G 336_E 0.95 0.00
198_M 255_L 0.95 0.00
224_Q 193_V 0.94 0.00
37_M 256_L 0.94 0.00
48_D 205_D 0.94 0.00
19_H 367_A 0.94 0.00
94_I 276_L 0.94 0.00
149_L 259_A 0.94 0.00
23_H 116_I 0.92 0.00
163_N 205_D 0.92 0.00
108_W 176_G 0.92 0.00
205_G 149_R 0.91 0.00
113_V 114_A 0.91 0.00
141_L 138_E 0.91 0.00
153_W 363_T 0.91 0.00
107_A 343_C 0.90 0.00
75_P 245_V 0.90 0.00
240_T 25_P 0.90 0.00
93_D 372_D 0.90 0.00
218_L 264_Y 0.89 0.00
130_V 154_D 0.89 0.00
197_A 86_H 0.89 0.00
206_A 363_T 0.88 0.00
201_L 53_S 0.88 0.00
175_L 157_H 0.88 0.00
6_K 238_F 0.87 0.00
31_A 202_M 0.87 0.00
48_D 208_G 0.87 0.00
114_Q 183_D 0.87 0.00
110_N 185_A 0.87 0.00
219_T 79_V 0.87 0.00
9_I 263_I 0.87 0.00
149_L 138_E 0.86 0.00
119_L 232_V 0.86 0.00
114_Q 243_A 0.86 0.00
230_W 134_A 0.86 0.00
29_Q 195_Q 0.85 0.00
48_D 257_Q 0.85 0.00
99_L 324_I 0.85 0.00
175_L 142_L 0.85 0.00
13_F 149_R 0.85 0.00
60_W 58_I 0.85 0.00
207_T 43_N 0.85 0.00
98_P 360_L 0.85 0.00
153_W 176_G 0.84 0.00
21_E 318_S 0.84 0.00
21_E 239_G 0.84 0.00
155_A 194_T 0.84 0.00
60_W 78_H 0.84 0.00
111_L 14_R 0.84 0.00
107_A 154_D 0.84 0.00
6_K 43_N 0.83 0.00
60_W 199_G 0.83 0.00
116_C 321_Q 0.83 0.00
225_R 57_Q 0.83 0.00
92_G 260_R 0.83 0.00
215_P 43_N 0.82 0.00
26_L 71_I 0.82 0.00
94_I 256_L 0.82 0.00
6_K 11_L 0.82 0.00
77_L 70_G 0.82 0.00
151_Q 39_R 0.82 0.00
226_L 139_A 0.82 0.00
171_I 372_D 0.82 0.00
96_S 18_D 0.82 0.00
92_G 366_A 0.82 0.00
109_S 347_A 0.82 0.00
178_V 126_I 0.82 0.00
77_L 58_I 0.82 0.00
114_Q 134_A 0.82 0.00
80_A 275_A 0.82 0.00
239_L 235_G 0.81 0.00
78_V 92_E 0.81 0.00
81_R 356_G 0.81 0.00
136_V 343_C 0.81 0.00
136_V 150_F 0.81 0.00
90_L 95_E 0.81 0.00
55_W 139_A 0.81 0.00
75_P 229_L 0.81 0.00
192_D 157_H 0.81 0.00
204_I 220_C 0.81 0.00
220_R 115_V 0.81 0.00
206_A 70_G 0.81 0.00
94_I 78_H 0.80 0.00
229_A 194_T 0.80 0.00
105_D 134_A 0.80 0.00
15_R 168_G 0.80 0.00
250_R 161_L 0.80 0.00
114_Q 263_I 0.80 0.00
105_D 260_R 0.80 0.00
19_H 357_T 0.80 0.00
77_L 104_L 0.80 0.00
197_A 157_H 0.80 0.00
81_R 27_A 0.80 0.00
14_G 116_I 0.80 0.00
101_T 371_Q 0.79 0.00
67_V 186_P 0.79 0.00
213_R 257_Q 0.79 0.00
116_C 77_G 0.79 0.00
187_I 46_S 0.79 0.00
215_P 196_Q 0.79 0.00
223_L 230_L 0.79 0.00
16_A 376_L 0.79 0.00
219_T 306_V 0.78 0.00
146_L 265_S 0.78 0.00
199_R 267_S 0.78 0.00
95_E 350_P 0.78 0.00
96_S 155_V 0.77 0.00
69_A 323_L 0.77 0.00
115_W 149_R 0.77 0.00
177_G 355_A 0.77 0.00
220_R 130_R 0.77 0.00
194_A 346_T 0.77 0.00
123_L 376_L 0.76 0.00
15_R 130_R 0.76 0.00
90_L 40_Q 0.76 0.00
75_P 173_V 0.76 0.00
51_C 36_A 0.76 0.00
56_M 157_H 0.76 0.00
89_Y 172_V 0.76 0.00
12_A 217_R 0.76 0.00
58_R 229_L 0.76 0.00
219_T 151_A 0.76 0.00
152_A 171_M 0.76 0.00
110_N 264_Y 0.76 0.00
42_K 22_R 0.76 0.00
154_Q 197_H 0.76 0.00
111_L 44_F 0.75 0.00
77_L 264_Y 0.75 0.00
200_S 302_F 0.75 0.00
137_A 214_E 0.75 0.00
95_E 255_L 0.75 0.00
22_Q 357_T 0.75 0.00
153_W 140_A 0.75 0.00
31_A 109_F 0.75 0.00
108_W 44_F 0.75 0.00
94_I 77_G 0.75 0.00
76_M 368_H 0.75 0.00
86_A 373_I 0.75 0.00
48_D 176_G 0.75 0.00
30_S 55_H 0.75 0.00
241_Y 231_V 0.74 0.00
76_M 316_S 0.74 0.00
175_L 211_V 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0775 seconds.