May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

KDGK - MDTE
UniProt: P37647 - P37636
Length: 694
Sequences: 569
Seq/Len: 0.87
I_Prob: 0.00

KDGK - 2-dehydro-3-deoxygluconokinase
Paralog alert: 0.85 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: FRLD K1PF K6PF2 KDGK PSUK RBSK YDJH YEGV YEII YIHV
MDTE - Multidrug resistance protein MdtE
Paralog alert: 0.77 [within 20: 0.16] - ratio of genomes with paralogs
Cluster includes: AAEA ACRA ACRE EMRA EMRK MACA MDTA MDTE MDTN YBHG YDHJ YHII YIAV YIBH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
281_E 333_I 1.12 0.00
289_L 172_V 0.97 0.00
291_A 132_N 0.93 0.00
232_D 222_M 0.93 0.00
249_V 72_I 0.91 0.00
213_V 272_L 0.90 0.00
72_V 119_R 0.89 0.00
279_S 304_V 0.87 0.00
192_D 167_L 0.85 0.00
287_G 242_L 0.83 0.00
237_S 174_S 0.83 0.00
223_K 172_V 0.81 0.00
193_I 118_A 0.80 0.00
72_V 216_V 0.80 0.00
77_T 72_I 0.80 0.00
163_V 355_V 0.79 0.00
227_V 223_K 0.78 0.00
236_V 107_S 0.77 0.00
34_S 54_G 0.76 0.00
154_R 355_V 0.75 0.00
194_A 345_V 0.75 0.00
186_Q 345_V 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 1.0652 seconds.