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OPENSEQ.org
FIMG - Protein FimG
UniProt: P08190 Sequence
 Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG10314
Length: 167 (163)
Sequences: 1545
Seq/Len: 9.48
FIMG
Paralog alert: 0.95 [within 20: 0.80] - ratio of genomes with paralogs
Cluster includes: ELFA FIMA1 FIMF FIMG FIMI SFMA SFMF YADN YBGD YCBU YCBV YDER YDES YFCP YFCV YGIL YRAH
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
109_L 142_V 3.252 1.00
60_S 63_A 2.936 1.00
105_Q 152_T 2.833 1.00
84_V 164_Y 2.79 1.00
110_E 143_R 2.748 1.00
110_E 145_L 2.663 1.00
144_A 156_I 2.581 1.00
71_A 137_H 2.393 1.00
97_Y 108_Q 2.372 1.00
112_Q 143_R 2.283 1.00
109_L 158_A 2.046 1.00
106_N 151_A 1.959 1.00
40_T 76_N 1.954 1.00
98_Y 121_T 1.854 1.00
98_Y 160_I 1.83 1.00
59_M 63_A 1.801 1.00
113_D 117_N 1.682 1.00
110_E 118_T 1.596 1.00
50_L 156_I 1.572 1.00
92_A 96_G 1.562 1.00
36_A 55_S 1.534 1.00
106_N 149_G 1.509 1.00
71_A 139_P 1.506 1.00
43_T 46_A 1.5 1.00
43_T 73_E 1.473 1.00
64_A 110_E 1.439 1.00
58_L 146_T 1.437 1.00
53_L 65_S 1.428 0.99
50_L 109_L 1.419 0.99
86_A 138_F 1.411 0.99
100_N 156_I 1.405 0.99
69_D 141_Q 1.398 0.99
146_T 151_A 1.369 0.99
64_A 143_R 1.364 0.99
97_Y 145_L 1.34 0.99
73_E 137_H 1.327 0.99
90_G 98_Y 1.322 0.99
107_I 144_A 1.313 0.99
93_D 108_Q 1.292 0.99
51_G 66_A 1.271 0.99
51_G 156_I 1.265 0.99
40_T 75_T 1.251 0.98
42_S 73_E 1.249 0.98
58_L 147_V 1.247 0.98
46_A 72_L 1.238 0.98
104_A 107_I 1.22 0.98
93_D 147_V 1.208 0.98
18_S 21_I 1.181 0.97
38_P 136_A 1.166 0.97
103_T 155_T 1.163 0.97
67_W 143_R 1.163 0.97
120_N 123_A 1.157 0.97
50_L 144_A 1.153 0.97
18_S 22_Q 1.151 0.97
58_L 151_A 1.134 0.96
64_A 112_Q 1.131 0.96
116_G 141_Q 1.128 0.96
60_S 146_T 1.121 0.96
46_A 162_I 1.115 0.96
64_A 145_L 1.102 0.96
5_K 14_L 1.097 0.95
32_G 88_F 1.086 0.95
33_K 52_D 1.074 0.95
70_V 111_L 1.071 0.95
26_V 162_I 1.062 0.94
34_V 53_L 1.055 0.94
87_S 165_T 1.051 0.94
95_T 120_N 1.046 0.94
127_V 130_D 1.046 0.94
29_T 159_V 1.041 0.94
58_L 149_G 1.034 0.93
57_S 65_S 1.026 0.93
98_Y 158_A 1.025 0.93
6_R 10_L 1.022 0.93
61_A 106_N 1.02 0.93
53_L 156_I 1.017 0.92
8_Y 11_A 1.012 0.92
69_D 139_P 1.007 0.92
58_L 107_I 1.006 0.92
7_G 14_L 1.006 0.92
85_T 165_T 1.003 0.92
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results: GREMLIN results overlayed on top 10 PDB hits:
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov P(%) HHΔ   Acc
2jmrA10.86831000.261Contact Map0.602
2xg5B10.95211000.274Contact Map0.693
2jtyA10.88621000.287Contact Map0.66
2uy6B20.87431000.29Contact Map0.8
1pdkB10.85031000.319Contact Map0.614
3bfqG10.790499.90.343Contact Map0.672
3bwuF10.790499.90.36Contact Map0.798
2w07B10.820499.90.371Contact Map0.668
4dwhB20.790499.90.371Contact Map0.738
3jwnH20.910299.90.432Contact Map0.687
Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.
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