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OPENSEQ.org
RUTA - RUTR
UniProt: P75898 - P0ACU2
Length: 594
Sequences: 795
Seq/Len: 1.44
I_Prob: 0.00
RUTA - Pyrimidine monooxygenase RutA
Paralog alert: 0.66 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: RUTA SSUD YHBW 		RUTR - HTH-type transcriptional regulator RutR
Paralog alert: 0.77 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: ACRR BDCR BETI COMR ENVR NEMR RUTR SLMA UIDR YBIH YBJK YJDC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
168_Q 145_I 0.94 0.00
172_D 143_A 0.94 0.00
218_R 100_L 0.85 0.00
333_M 40_R 0.84 0.00
250_T 205_I 0.82 0.00
235_A 145_I 0.81 0.00
340_V 94_I 0.79 0.00
189_N 23_I 0.78 0.00
91_A 63_E 0.76 0.00
47_E 128_D 0.74 0.00
41_Q 44_I 0.74 0.00
266_E 149_V 0.74 0.00
272_R 44_I 0.73 0.00
330_V 52_K 0.73 0.00
247_A 148_W 0.72 0.00
57_E 141_K 0.72 0.00
96_V 154_L 0.72 0.00
339_S 23_I 0.71 0.00
262_V 24_L 0.71 0.00
330_V 132_G 0.71 0.00
57_E 157_I 0.70 0.00
106_A 139_D 0.70 0.00
95_A 29_D 0.70 0.00
348_L 75_D 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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