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OPENSEQ.org

PTKA - YEGV
UniProt: P69828 - P76419
Length: 471
Sequences: 959
Seq/Len: 2.20
I_Prob: 0.00

PTKA - Galactitol-specific phosphotransferase enzyme IIA component
Paralog alert: 0.73 [within 20: 0.19] - ratio of genomes with paralogs
Cluster includes: PTFA PTKA PTMA PTSN SGCA ULAC
YEGV - Uncharacterized sugar kinase YegV
Paralog alert: 0.85 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: FRLD K1PF K6PF2 KDGK PSUK RBSK YDJH YEGV YEII YIHV
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
26_M 27_I 1.00 0.00
57_A 273_G 0.90 0.00
67_H 63_L 0.90 0.00
85_Q 140_V 0.88 0.00
22_I 252_G 0.87 0.00
10_I 94_L 0.84 0.00
115_C 36_L 0.84 0.00
98_V 33_A 0.82 0.00
46_E 198_L 0.81 0.00
22_I 304_G 0.80 0.00
35_T 101_A 0.80 0.00
82_V 222_L 0.80 0.00
26_M 173_P 0.80 0.00
26_M 77_G 0.80 0.00
42_A 132_R 0.80 0.00
116_L 274_G 0.79 0.00
84_F 86_R 0.79 0.00
15_R 266_G 0.78 0.00
6_V 309_P 0.78 0.00
136_Q 249_D 0.78 0.00
110_L 289_V 0.77 0.00
110_L 58_N 0.77 0.00
39_A 86_R 0.76 0.00
68_A 59_I 0.75 0.00
82_V 86_R 0.74 0.00
133_P 220_T 0.74 0.00
103_V 274_G 0.74 0.00
60_I 265_I 0.74 0.00
134_E 228_E 0.74 0.00
63_C 299_V 0.73 0.00
82_V 240_K 0.73 0.00
8_S 292_G 0.72 0.00
111_K 116_G 0.72 0.00
82_V 130_W 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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