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OPENSEQ.org

YIAJ - YIAO
UniProt: P37671 - P37676
Length: 610
Sequences: 382
Seq/Len: 0.69
I_Prob: 0.00

YIAJ - HTH-type transcriptional regulator YiaJ
Paralog alert: 0.70 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: ALLR ICLR KDGR MHPR RHMR YAGI YIAJ YJHI
YIAO - 2,3-diketo-L-gulonate-binding periplasmic protein YiaO
Paralog alert: 0.60 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: YIAO
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
185_P 55_T 1.03 0.00
210_A 103_L 1.02 0.00
158_A 253_Q 1.00 0.00
171_Y 74_A 0.95 0.00
90_V 187_P 0.95 0.00
227_V 161_A 0.94 0.00
121_F 159_T 0.93 0.00
38_N 65_P 0.93 0.00
213_R 79_V 0.88 0.00
108_L 255_A 0.88 0.00
164_M 309_M 0.85 0.00
169_P 256_L 0.84 0.00
126_D 49_D 0.83 0.00
59_V 103_L 0.83 0.00
45_L 230_H 0.82 0.00
95_L 86_M 0.81 0.00
53_G 299_S 0.81 0.00
270_L 164_K 0.79 0.00
176_W 168_I 0.78 0.00
258_P 193_A 0.77 0.00
163_Y 240_I 0.77 0.00
79_G 249_S 0.77 0.00
57_S 266_Y 0.77 0.00
55_N 253_Q 0.77 0.00
158_A 53_E 0.76 0.00
108_L 160_P 0.76 0.00
71_Y 183_F 0.76 0.00
172_V 150_V 0.76 0.00
202_A 292_D 0.75 0.00
266_I 196_Y 0.75 0.00
209_A 200_E 0.75 0.00
108_L 106_V 0.75 0.00
111_L 273_E 0.75 0.00
28_R 143_W 0.75 0.00
30_L 28_L 0.74 0.00
206_E 45_K 0.74 0.00
122_S 99_P 0.74 0.00
71_Y 89_S 0.73 0.00
121_F 158_K 0.73 0.00
56_K 59_L 0.72 0.00
112_N 187_P 0.72 0.00
200_E 103_L 0.72 0.00
110_A 74_A 0.72 0.00
230_I 29_R 0.72 0.00
59_V 44_A 0.72 0.00
48_L 157_V 0.71 0.00
184_Q 61_L 0.71 0.00
127_D 277_K 0.71 0.00
72_V 223_Q 0.71 0.00
87_F 250_P 0.71 0.00
169_P 157_V 0.71 0.00
165_A 205_D 0.71 0.00
33_I 240_I 0.71 0.00
199_D 222_V 0.71 0.00
201_L 254_Q 0.71 0.00
59_V 53_E 0.70 0.00
158_A 246_D 0.70 0.00
258_P 54_R 0.69 0.00
127_D 244_K 0.69 0.00
205_R 304_N 0.69 0.00
100_I 283_K 0.69 0.00
235_P 61_L 0.69 0.00
72_V 292_D 0.69 0.00
90_V 206_A 0.68 0.00
263_A 221_E 0.68 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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