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OPENSEQ.org
YDJA - YDJG
UniProt: P0ACY1 - P77256
Length: 509
Sequences: 389
Seq/Len: 0.77
I_Prob: 0.00
YDJA - Putative NAD(P)H nitroreductase YdjA
Paralog alert: 0.81 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: NFNB RUTE YDJA 		YDJG - Uncharacterized oxidoreductase YdjG
Paralog alert: 0.83 [within 20: 0.20] - ratio of genomes with paralogs
Cluster includes: DKGA DKGB GPR TAS YAJO YDBC YDHF YDJG YEAE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
121_A 289_L 0.92 0.00
24_E 117_E 0.91 0.00
16_L 119_A 0.90 0.00
92_V 13_L 0.89 0.00
38_D 46_H 0.87 0.00
119_Q 5_P 0.85 0.00
127_F 53_I 0.82 0.00
22_T 313_D 0.82 0.00
29_I 261_Q 0.81 0.00
146_F 127_I 0.80 0.00
148_C 312_A 0.79 0.00
38_D 284_D 0.79 0.00
158_L 231_R 0.79 0.00
130_I 130_I 0.79 0.00
7_L 10_D 0.78 0.00
147_G 173_A 0.77 0.00
121_A 306_N 0.77 0.00
92_V 280_L 0.77 0.00
139_S 289_L 0.76 0.00
21_P 180_L 0.75 0.00
127_F 204_L 0.75 0.00
85_R 313_D 0.75 0.00
49_V 285_L 0.75 0.00
29_I 251_L 0.73 0.00
125_Q 73_K 0.73 0.00
31_R 119_A 0.73 0.00
58_F 211_G 0.72 0.00
81_N 268_Q 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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