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OPENSEQ.org

PSUK - RSUA
UniProt: P30235 - P0AA43
Length: 544
Sequences: 439
Seq/Len: 0.82
I_Prob: 0.00

PSUK - Pseudouridine kinase
Paralog alert: 0.85 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: FRLD K1PF K6PF2 KDGK PSUK RBSK YDJH YEGV YEII YIHV
RSUA - Ribosomal small subunit pseudouridine synthase A
Paralog alert: 0.95 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: RLUA RLUB RLUC RLUD RLUE RLUF RSUA TRUC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
81_V 168_V 1.00 0.00
285_M 174_V 0.98 0.00
84_D 27_V 0.89 0.00
220_L 94_K 0.88 0.00
212_F 27_V 0.86 0.00
284_S 110_L 0.83 0.00
263_A 136_L 0.80 0.00
260_A 29_V 0.78 0.00
54_G 3_L 0.78 0.00
203_E 32_E 0.77 0.00
194_L 63_F 0.76 0.00
263_A 40_K 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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