May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ZNUA - ZNUC
UniProt: P39172 - P0A9X1
Length: 561
Sequences: 2278
Seq/Len: 4.51
I_Prob: 0.00
ZNUA - High-affinity zinc uptake system protein ZnuA
Paralog alert: 0.55 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: ZNUA 		ZNUC - Zinc import ATP-binding protein ZnuC
Paralog alert: 0.94 [within 20: 0.83] - ratio of genomes with paralogs
Cluster includes: ARTP BTUD CCMA CYSA DDPD DDPF DPPD DPPF FBPC FECE FEPC FHUC FTSE GLNQ GLTL HISP LIVF LIVG LOLD LPTB MALK METN MLAF MODC NIKD NIKE OPPD OPPF PHNC PHNK PHNL POTA POTG PROV PSTB SAPD SAPF SSUB SUFC TAUB THIQ UGPC YADG YBBA YBBL YCJV YDCT YECC YEHX YHDZ YNJD ZNUC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
253_V 105_L 0.68 0.00
31_S 178_S 0.59 0.00
88_F 144_L 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 0.0817 seconds.