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CCMA - CCMD
UniProt: P33931 - P0ABM5
Length: 276
Sequences: 250
Seq/Len: 0.93
I_Prob: 0.04

CCMA - Cytochrome c biogenesis ATP-binding export protein CcmA
Paralog alert: 0.94 [within 20: 0.86] - ratio of genomes with paralogs
Cluster includes: ARTP BTUD CCMA CYSA DDPD DDPF DPPD DPPF FBPC FECE FEPC FHUC FTSE GLNQ GLTL HISP LIVF LIVG LOLD LPTB MALK METN MLAF MODC NIKD NIKE OPPD OPPF PHNC PHNK PHNL POTA POTG PROV PSTB SAPD SAPF SSUB SUFC TAUB THIQ UGPC YADG YBBA YBBL YCJV YDCT YECC YEHX YHDZ YNJD ZNUC
CCMD - Heme exporter protein D
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: CCMD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
131_A 5_F 1.59 0.04
134_Q 5_F 1.27 0.02
60_V 7_S 1.24 0.02
185_T 53_Q 1.19 0.01
12_E 17_Y 1.18 0.01
72_D 10_E 1.18 0.01
121_F 51_A 1.14 0.01
189_L 32_L 1.13 0.01
53_S 23_L 1.13 0.01
197_R 47_L 1.11 0.01
199_I 24_A 1.08 0.01
71_R 30_I 1.05 0.01
111_E 10_E 1.04 0.01
3_M 17_Y 1.03 0.01
28_A 33_V 1.03 0.01
14_D 32_L 1.02 0.01
94_L 26_V 1.01 0.01
57_A 33_V 1.00 0.01
131_A 35_L 0.99 0.01
26_L 30_I 0.99 0.01
161_V 20_F 0.97 0.01
165_D 13_A 0.96 0.01
17_T 43_H 0.95 0.01
181_V 27_M 0.94 0.01
44_T 4_A 0.94 0.01
123_D 50_V 0.93 0.01
10_L 30_I 0.93 0.01
156_F 46_I 0.93 0.01
15_E 41_M 0.92 0.01
167_L 44_R 0.91 0.01
86_G 20_F 0.91 0.01
33_Q 31_P 0.90 0.01
131_A 56_R 0.90 0.01
125_P 45_A 0.90 0.01
99_F 17_Y 0.89 0.01
182_I 64_Q 0.88 0.01
114_A 55_A 0.88 0.01
49_L 29_V 0.87 0.01
126_V 17_Y 0.87 0.01
131_A 23_L 0.87 0.01
3_M 12_F 0.87 0.01
143_W 55_A 0.87 0.01
149_L 13_A 0.86 0.01
14_D 20_F 0.86 0.01
34_I 5_F 0.86 0.00
171_M 17_Y 0.85 0.00
183_L 57_E 0.85 0.00
191_V 24_A 0.85 0.00
143_W 17_Y 0.85 0.00
187_Q 35_L 0.85 0.00
120_G 56_R 0.84 0.00
183_L 26_V 0.84 0.00
80_W 67_E 0.84 0.00
93_A 44_R 0.83 0.00
169_Q 58_A 0.83 0.00
116_A 5_F 0.83 0.00
159_I 5_F 0.83 0.00
82_G 26_V 0.82 0.00
87_I 33_V 0.82 0.00
63_Q 26_V 0.81 0.00
24_F 18_A 0.81 0.00
121_F 25_V 0.81 0.00
117_G 2_T 0.81 0.00
143_W 39_S 0.81 0.00
185_T 40_V 0.81 0.00
122_E 20_F 0.81 0.00
126_V 18_A 0.81 0.00
44_T 57_E 0.81 0.00
188_P 53_Q 0.81 0.00
89_T 5_F 0.80 0.00
137_V 61_R 0.80 0.00
123_D 52_Q 0.79 0.00
199_I 30_I 0.79 0.00
80_W 19_F 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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