May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
OSMF - YEHX
UniProt: P33362 - P33360
Length: 613
Sequences: 755
Seq/Len: 1.28
I_Prob: 0.00
OSMF - Putative osmoprotectant uptake system substrate-binding protein OsmF
Paralog alert: 0.33 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: OSMF 		YEHX - Putative osmoprotectant uptake system ATP-binding protein YehX
Paralog alert: 0.94 [within 20: 0.63] - ratio of genomes with paralogs
Cluster includes: ARTP BTUD CCMA CYSA DDPD DDPF DPPD DPPF FBPC FECE FEPC FHUC FTSE GLNQ GLTL HISP LIVF LIVG LOLD LPTB MALK METN MLAF MODC NIKD NIKE OPPD OPPF PHNC PHNK PHNL POTA POTG PROV PSTB SAPD SAPF SSUB SUFC TAUB THIQ UGPC YADG YBBA YBBL YCJV YDCT YECC YEHX YHDZ YNJD ZNUC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
218_A 45_K 1.26 0.00
43_I 11_F 1.12 0.00
61_L 214_V 0.97 0.00
255_R 154_Q 0.91 0.00
61_L 165_L 0.90 0.00
263_W 92_V 0.87 0.00
136_Q 21_N 0.87 0.00
220_G 165_L 0.86 0.00
145_T 5_S 0.85 0.00
44_I 163_G 0.84 0.00
183_G 118_M 0.83 0.00
225_V 151_A 0.83 0.00
226_A 54_D 0.79 0.00
167_E 100_P 0.79 0.00
28_K 62_G 0.78 0.00
278_Q 108_A 0.78 0.00
232_T 202_A 0.77 0.00
303_W 124_E 0.76 0.00
140_E 109_R 0.76 0.00
215_A 4_F 0.75 0.00
145_T 61_A 0.75 0.00
238_G 55_S 0.75 0.00
253_V 58_I 0.75 0.00
56_V 180_I 0.74 0.00
151_S 189_V 0.74 0.00
43_I 180_I 0.74 0.00
296_D 252_D 0.73 0.00
142_N 3_E 0.72 0.00
151_S 146_A 0.72 0.00
75_E 98_T 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 0.0326 seconds.