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OPENSEQ.org

RHLE - RHTA
UniProt: P25888 - P0AA67
Length: 749
Sequences: 599
Seq/Len: 0.92
I_Prob: 0.00

RHLE - ATP-dependent RNA helicase RhlE
Paralog alert: 0.86 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: DBPA DEAD RHLB RHLE SRMB
RHTA - Inner membrane transporter RhtA
Paralog alert: 0.84 [within 20: 0.20] - ratio of genomes with paralogs
Cluster includes: EAMA RHTA YDDG YEDA YHBE YICL YIJE YTFF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
173_V 106_T 1.17 0.00
130_V 54_I 1.16 0.00
250_V 126_V 1.15 0.00
320_Y 158_A 1.08 0.00
320_Y 221_L 1.07 0.00
99_S 100_A 0.96 0.00
8_L 54_I 0.93 0.00
130_V 247_A 0.92 0.00
250_V 239_G 0.92 0.00
198_A 123_V 0.92 0.00
5_S 91_S 0.91 0.00
148_D 261_L 0.87 0.00
39_R 216_I 0.87 0.00
173_V 184_L 0.85 0.00
198_A 109_L 0.83 0.00
80_I 223_Y 0.83 0.00
55_F 229_A 0.82 0.00
63_L 221_L 0.81 0.00
80_I 57_A 0.81 0.00
180_K 127_L 0.81 0.00
184_L 253_G 0.81 0.00
137_L 159_C 0.80 0.00
311_I 231_T 0.79 0.00
80_I 202_L 0.78 0.00
29_Q 43_V 0.78 0.00
153_L 274_A 0.78 0.00
129_L 22_A 0.77 0.00
109_V 184_L 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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