May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

IHFA - K6PF2
UniProt: P0A6X7 - P06999
Length: 408
Sequences: 260
Seq/Len: 0.66
I_Prob: 0.00

IHFA - Integration host factor subunit alpha
Paralog alert: 0.56 [within 20: 0.04] - ratio of genomes with paralogs
Cluster includes: DBHA DBHB IHFA IHFB
K6PF2 - 6-phosphofructokinase isozyme 2
Paralog alert: 0.85 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: FRLD K1PF K6PF2 KDGK PSUK RBSK YDJH YEGV YEII YIHV
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
37_A 223_V 1.23 0.00
12_L 283_G 1.05 0.00
83_P 264_L 1.05 0.00
9_S 87_D 1.04 0.00
35_R 274_E 1.02 0.00
46_L 202_P 1.00 0.00
54_L 252_V 0.98 0.00
46_L 74_A 0.93 0.00
46_L 203_D 0.93 0.00
84_G 212_I 0.92 0.00
7_E 46_R 0.91 0.00
23_A 45_A 0.90 0.00
22_D 45_A 0.90 0.00
71_I 248_S 0.89 0.00
37_A 77_N 0.88 0.00
89_S 237_N 0.87 0.00
14_D 48_I 0.86 0.00
84_G 222_V 0.85 0.00
6_A 61_A 0.85 0.00
39_E 283_G 0.85 0.00
75_A 160_G 0.85 0.00
49_F 164_I 0.85 0.00
46_L 184_V 0.84 0.00
7_E 238_C 0.84 0.00
88_K 233_V 0.84 0.00
78_V 251_T 0.84 0.00
72_P 59_F 0.83 0.00
5_K 119_R 0.83 0.00
80_T 225_L 0.83 0.00
83_P 252_V 0.83 0.00
9_S 263_T 0.83 0.00
27_V 283_G 0.83 0.00
34_I 19_T 0.82 0.00
88_K 194_L 0.82 0.00
30_F 96_H 0.82 0.00
61_P 260_G 0.82 0.00
13_F 101_G 0.82 0.00
6_A 257_S 0.82 0.00
40_N 211_E 0.81 0.00
40_N 206_R 0.81 0.00
11_Y 77_N 0.81 0.00
70_D 163_C 0.80 0.00
61_P 83_V 0.80 0.00
78_V 263_T 0.80 0.00
4_T 51_L 0.80 0.00
12_L 270_A 0.80 0.00
7_E 252_V 0.79 0.00
43_Q 283_G 0.79 0.00
12_L 243_P 0.79 0.00
78_V 235_S 0.79 0.00
51_N 186_P 0.79 0.00
44_V 34_V 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0539 seconds.