| UniProt: | P0AB87 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10348 | ||
| Length: | 215 (208) | ||
| Sequences: | 2936 | ||
| Seq/Len: | 14.12 |
| FUCA
Paralog alert: 0.63 [within 20: 0.04] - ratio of genomes with paralogs Cluster includes: ARAD FUCA RHAD SGBE ULAF YGBL |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 59_D | 63_K | 5.482 | 1.00 | |
| 97_H | 183_T | 3.298 | 1.00 | |
| 162_V | 166_K | 3.146 | 1.00 | |
| 179_Q | 183_T | 2.809 | 1.00 | |
| 38_M | 78_M | 2.618 | 1.00 | |
| 106_R | 185_L | 2.557 | 1.00 | |
| 39_L | 55_I | 2.556 | 1.00 | |
| 9_Q | 165_E | 2.331 | 1.00 | |
| 11_I | 52_E | 2.295 | 1.00 | |
| 134_R | 138_E | 2.213 | 1.00 | |
| 8_R | 12_D | 2.114 | 1.00 | |
| 87_A | 160_C | 2.107 | 1.00 | |
| 149_A | 174_V | 1.979 | 1.00 | |
| 6_L | 32_V | 1.962 | 1.00 | |
| 96_V | 179_Q | 1.911 | 1.00 | |
| 97_H | 179_Q | 1.9 | 1.00 | |
| 39_L | 57_F | 1.896 | 1.00 | |
| 195_S | 198_E | 1.87 | 1.00 | |
| 100_A | 183_T | 1.863 | 1.00 | |
| 124_P | 147_R | 1.856 | 1.00 | |
| 91_V | 167_A | 1.833 | 1.00 | |
| 97_H | 182_L | 1.83 | 1.00 | |
| 163_N | 166_K | 1.82 | 1.00 | |
| 89_A | 164_L | 1.819 | 1.00 | |
| 79_A | 138_E | 1.771 | 1.00 | |
| 32_V | 164_L | 1.77 | 1.00 | |
| 88_N | 163_N | 1.692 | 1.00 | |
| 61_N | 82_Q | 1.665 | 1.00 | |
| 196_D | 200_A | 1.636 | 1.00 | |
| 79_A | 83_S | 1.626 | 1.00 | |
| 11_I | 15_L | 1.623 | 1.00 | |
| 8_R | 52_E | 1.611 | 1.00 | |
| 107_S | 122_S | 1.605 | 1.00 | |
| 105_N | 153_Q | 1.596 | 1.00 | |
| 157_L | 174_V | 1.586 | 1.00 | |
| 51_T | 54_H | 1.577 | 1.00 | |
| 34_Y | 39_L | 1.563 | 1.00 | |
| 79_A | 82_Q | 1.507 | 1.00 | |
| 93_N | 171_A | 1.424 | 1.00 | |
| 16_E | 20_L | 1.406 | 0.99 | |
| 159_A | 171_A | 1.403 | 0.99 | |
| 98_C | 157_L | 1.4 | 0.99 | |
| 197_E | 201_V | 1.4 | 0.99 | |
| 10_I | 55_I | 1.39 | 0.99 | |
| 58_I | 74_W | 1.374 | 0.99 | |
| 161_E | 166_K | 1.366 | 0.99 | |
| 78_M | 82_Q | 1.348 | 0.99 | |
| 127_P | 153_Q | 1.346 | 0.99 | |
| 95_A | 98_C | 1.339 | 0.99 | |
| 34_Y | 57_F | 1.337 | 0.99 | |
| 94_H | 155_H | 1.333 | 0.99 | |
| 101_V | 185_L | 1.322 | 0.99 | |
| 38_M | 60_G | 1.321 | 0.99 | |
| 20_L | 172_H | 1.321 | 0.99 | |
| 92_H | 155_H | 1.321 | 0.99 | |
| 157_L | 171_A | 1.32 | 0.99 | |
| 108_I | 178_A | 1.32 | 0.99 | |
| 5_K | 9_Q | 1.308 | 0.99 | |
| 54_H | 68_K | 1.301 | 0.99 | |
| 138_E | 142_L | 1.294 | 0.99 | |
| 10_I | 30_V | 1.287 | 0.99 | |
| 37_G | 57_F | 1.285 | 0.99 | |
| 104_L | 187_I | 1.281 | 0.99 | |
| 204_E | 207_K | 1.281 | 0.99 | |
| 83_S | 145_K | 1.274 | 0.99 | |
| 96_V | 100_A | 1.26 | 0.99 | |
| 127_P | 142_L | 1.256 | 0.99 | |
| 149_A | 159_A | 1.252 | 0.99 | |
| 142_L | 145_K | 1.247 | 0.99 | |
| 99_T | 102_S | 1.241 | 0.98 | |
| 13_T | 168_L | 1.237 | 0.98 | |
| 176_V | 179_Q | 1.231 | 0.98 | |
| 83_S | 141_A | 1.228 | 0.98 | |
| 84_R | 87_A | 1.227 | 0.98 | |
| 15_L | 19_R | 1.216 | 0.98 | |
| 183_T | 186_A | 1.216 | 0.98 | |
| 175_E | 179_Q | 1.21 | 0.98 | |
| 182_L | 186_A | 1.183 | 0.98 | |
| 76_F | 158_I | 1.182 | 0.98 | |
| 80_A | 87_A | 1.175 | 0.98 | |
| 182_L | 187_I | 1.148 | 0.97 | |
| 73_E | 136_L | 1.144 | 0.97 | |
| 32_V | 89_A | 1.133 | 0.97 | |
| 17_M | 168_L | 1.119 | 0.96 | |
| 181_Y | 185_L | 1.118 | 0.96 | |
| 161_E | 170_L | 1.117 | 0.96 | |
| 109_P | 181_Y | 1.114 | 0.96 | |
| 50_L | 54_H | 1.107 | 0.96 | |
| 105_N | 190_P | 1.104 | 0.96 | |
| 38_M | 74_W | 1.086 | 0.96 | |
| 96_V | 183_T | 1.084 | 0.96 | |
| 129_A | 139_H | 1.08 | 0.95 | |
| 16_E | 19_R | 1.073 | 0.95 | |
| 140_V | 152_L | 1.065 | 0.95 | |
| 152_L | 158_I | 1.056 | 0.95 | |
| 17_M | 91_V | 1.054 | 0.95 | |
| 11_I | 55_I | 1.053 | 0.95 | |
| 139_H | 142_L | 1.038 | 0.94 | |
| 14_C | 30_V | 1.037 | 0.94 | |
| 107_S | 125_C | 1.036 | 0.94 | |
| 33_R | 88_N | 1.035 | 0.94 | |
| 42_P | 45_I | 1.015 | 0.93 | |
| 135_E | 138_E | 1.001 | 0.92 | |
| 96_V | 176_V | 1 | 0.92 | |
| 148_K | 170_L | 1 | 0.92 | |
| 41_T | 81_Y | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1e4cP | 1 | 1 | 100 | 0.046 | Contact Map | 0.726 |
| 2opiA | 2 | 0.9442 | 100 | 0.104 | Contact Map | 0.696 |
| 3ocrA | 2 | 0.9953 | 100 | 0.13 | Contact Map | 0.686 |
| 1k0wA | 6 | 0.9721 | 100 | 0.141 | Contact Map | 0.8 |
| 2v9lA | 1 | 0.9814 | 100 | 0.149 | Contact Map | 0.616 |
| 2z7bA | 1 | 0.9767 | 100 | 0.159 | Contact Map | 0.703 |
| 2fk5A | 2 | 0.8884 | 100 | 0.169 | Contact Map | 0.666 |
| 1pvtA | 1 | 0.907 | 100 | 0.173 | Contact Map | 0.581 |
| 2irpA | 2 | 0.8744 | 100 | 0.205 | Contact Map | 0.718 |
| 3m4rA | 1 | 0.8279 | 100 | 0.295 | Contact Map | 0.613 |
Sequence Conservation (Image Generated using WebLogo v3)