| UniProt: | P0A8G6 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11540 | ||
| Length: | 198 (197) | ||
| Sequences: | 2086 | ||
| Seq/Len: | 10.59 |
| NQOR
Paralog alert: 0.30 [within 20: 0.03] - ratio of genomes with paralogs Cluster includes: AZOR KEFF KEFG MDAB NQOR YCAK |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 35_V | 65_E | 3.538 | 1.00 | |
| 18_M | 182_A | 2.624 | 1.00 | |
| 187_E | 191_G | 2.494 | 1.00 | |
| 29_V | 187_E | 2.491 | 1.00 | |
| 21_A | 24_E | 2.47 | 1.00 | |
| 21_A | 183_R | 2.424 | 1.00 | |
| 109_S | 185_Q | 2.283 | 1.00 | |
| 176_Q | 180_S | 2.255 | 1.00 | |
| 9_Y | 84_S | 2.188 | 1.00 | |
| 25_G | 186_G | 2.175 | 1.00 | |
| 88_R | 92_D | 2.153 | 1.00 | |
| 26_A | 34_V | 2.113 | 1.00 | |
| 73_I | 189_V | 2.085 | 1.00 | |
| 6_V | 23_A | 2.065 | 1.00 | |
| 76_T | 84_S | 1.989 | 1.00 | |
| 45_P | 49_E | 1.979 | 1.00 | |
| 110_V | 127_T | 1.97 | 1.00 | |
| 24_E | 183_R | 1.946 | 1.00 | |
| 3_K | 33_E | 1.878 | 1.00 | |
| 15_I | 75_G | 1.812 | 1.00 | |
| 20_R | 36_V | 1.808 | 1.00 | |
| 24_E | 28_K | 1.764 | 1.00 | |
| 64_Q | 68_D | 1.76 | 1.00 | |
| 94_T | 134_H | 1.753 | 1.00 | |
| 23_A | 28_K | 1.726 | 1.00 | |
| 4_V | 71_A | 1.708 | 1.00 | |
| 21_A | 179_L | 1.693 | 1.00 | |
| 122_Q | 125_T | 1.692 | 1.00 | |
| 112_S | 163_T | 1.688 | 1.00 | |
| 16_E | 20_R | 1.683 | 1.00 | |
| 85_G | 89_T | 1.675 | 1.00 | |
| 186_G | 190_A | 1.667 | 1.00 | |
| 5_L | 69_Y | 1.642 | 1.00 | |
| 82_N | 126_S | 1.518 | 1.00 | |
| 182_A | 186_G | 1.511 | 1.00 | |
| 88_R | 130_T | 1.507 | 1.00 | |
| 150_D | 177_E | 1.495 | 1.00 | |
| 73_I | 109_S | 1.467 | 1.00 | |
| 30_D | 194_V | 1.445 | 1.00 | |
| 17_T | 20_R | 1.423 | 1.00 | |
| 125_T | 129_T | 1.419 | 1.00 | |
| 22_V | 111_F | 1.412 | 1.00 | |
| 67_A | 102_A | 1.406 | 0.99 | |
| 76_T | 127_T | 1.385 | 0.99 | |
| 107_L | 196_L | 1.379 | 0.99 | |
| 97_L | 102_A | 1.366 | 0.99 | |
| 108_A | 136_M | 1.362 | 0.99 | |
| 108_A | 131_L | 1.347 | 0.99 | |
| 76_T | 83_M | 1.345 | 0.99 | |
| 74_F | 127_T | 1.336 | 0.99 | |
| 48_F | 53_G | 1.336 | 0.99 | |
| 83_M | 88_R | 1.329 | 0.99 | |
| 158_T | 163_T | 1.328 | 0.99 | |
| 180_S | 183_R | 1.313 | 0.99 | |
| 132_A | 140_P | 1.3 | 0.99 | |
| 104_Y | 144_A | 1.289 | 0.99 | |
| 147_E | 180_S | 1.286 | 0.99 | |
| 71_A | 189_V | 1.285 | 0.99 | |
| 83_M | 126_S | 1.283 | 0.99 | |
| 67_A | 97_L | 1.271 | 0.99 | |
| 22_V | 186_G | 1.26 | 0.99 | |
| 37_K | 65_E | 1.257 | 0.99 | |
| 3_K | 68_D | 1.251 | 0.99 | |
| 42_T | 89_T | 1.248 | 0.99 | |
| 191_G | 195_K | 1.241 | 0.98 | |
| 155_R | 177_E | 1.235 | 0.98 | |
| 35_V | 69_Y | 1.233 | 0.98 | |
| 8_Y | 16_E | 1.232 | 0.98 | |
| 45_P | 48_F | 1.228 | 0.98 | |
| 78_T | 123_T | 1.215 | 0.98 | |
| 22_V | 73_I | 1.215 | 0.98 | |
| 64_Q | 67_A | 1.214 | 0.98 | |
| 139_V | 192_L | 1.204 | 0.98 | |
| 71_A | 107_L | 1.203 | 0.98 | |
| 72_I | 136_M | 1.193 | 0.98 | |
| 75_G | 111_F | 1.19 | 0.98 | |
| 20_R | 28_K | 1.179 | 0.98 | |
| 14_H | 170_G | 1.167 | 0.97 | |
| 109_S | 189_V | 1.155 | 0.97 | |
| 17_T | 179_L | 1.153 | 0.97 | |
| 132_A | 138_I | 1.144 | 0.97 | |
| 22_V | 75_G | 1.135 | 0.97 | |
| 107_L | 189_V | 1.117 | 0.96 | |
| 19_A | 23_A | 1.112 | 0.96 | |
| 175_S | 178_E | 1.111 | 0.96 | |
| 192_L | 196_L | 1.108 | 0.96 | |
| 74_F | 87_M | 1.094 | 0.96 | |
| 146_Q | 149_F | 1.084 | 0.96 | |
| 29_V | 183_R | 1.083 | 0.96 | |
| 23_A | 34_V | 1.078 | 0.95 | |
| 101_G | 104_Y | 1.067 | 0.95 | |
| 48_F | 52_G | 1.064 | 0.95 | |
| 44_P | 89_T | 1.062 | 0.95 | |
| 45_P | 52_G | 1.055 | 0.95 | |
| 193_A | 197_N | 1.054 | 0.95 | |
| 66_L | 90_F | 1.048 | 0.94 | |
| 5_L | 37_K | 1.035 | 0.94 | |
| 141_I | 181_I | 1.029 | 0.94 | |
| 6_V | 19_A | 1.023 | 0.93 | |
| 5_L | 65_E | 1.022 | 0.93 | |
| 23_A | 36_V | 1.022 | 0.93 | |
| 76_T | 112_S | 1.018 | 0.93 | |
| 82_N | 88_R | 1.017 | 0.93 | |
| 189_V | 193_A | 1.017 | 0.93 | |
| 86_Q | 92_D | 1.01 | 0.93 | |
| 16_E | 38_R | 1.002 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1ydgA | 8 | 0.9545 | 100 | 0.379 | Contact Map | 0.822 |
| 4dy4A | 2 | 0.9798 | 100 | 0.38 | Contact Map | 0.762 |
| 3zhoA | 2 | 0.9798 | 100 | 0.387 | Contact Map | 0.761 |
| 2a5lA | 2 | 0.9747 | 100 | 0.391 | Contact Map | 0.796 |
| 2zkiA | 8 | 0.9596 | 100 | 0.405 | Contact Map | 0.819 |
| 1rliA | 4 | 0.8333 | 100 | 0.426 | Contact Map | 0.723 |
| 1sqsA | 2 | 0.8535 | 100 | 0.436 | Contact Map | 0.737 |
| 3d7nA | 1 | 0.899 | 100 | 0.445 | Contact Map | 0.682 |
| 2hpvA | 4 | 0.8535 | 100 | 0.458 | Contact Map | 0.619 |
| 3p0rA | 1 | 0.8535 | 100 | 0.466 | Contact Map | 0.604 |
Sequence Conservation (Image Generated using WebLogo v3)