| UniProt: | P0A756 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12902 | ||
| Length: | 184 (174) | ||
| Sequences: | 2588 | ||
| Seq/Len: | 14.87 |
| KEFG
Paralog alert: 0.61 [within 20: 0.03] - ratio of genomes with paralogs Cluster includes: AZOR KEFF KEFG MDAB NQOR YCAK |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 39_H | 58_L | 3.354 | 1.00 | |
| 37_T | 61_E | 3.109 | 1.00 | |
| 7_K | 35_N | 2.913 | 1.00 | |
| 40_D | 43_A | 2.737 | 1.00 | |
| 106_W | 140_A | 2.69 | 1.00 | |
| 37_T | 58_L | 2.565 | 1.00 | |
| 57_A | 61_E | 2.488 | 1.00 | |
| 82_E | 86_R | 2.381 | 1.00 | |
| 81_K | 85_D | 2.128 | 1.00 | |
| 37_T | 62_H | 2.125 | 1.00 | |
| 106_W | 145_M | 1.927 | 1.00 | |
| 65_I | 145_M | 1.851 | 1.00 | |
| 64_V | 105_Y | 1.835 | 1.00 | |
| 76_C | 135_P | 1.779 | 1.00 | |
| 7_K | 61_E | 1.765 | 1.00 | |
| 161_A | 165_A | 1.762 | 1.00 | |
| 13_A | 79_L | 1.707 | 1.00 | |
| 84_L | 139_A | 1.65 | 1.00 | |
| 8_V | 34_S | 1.642 | 1.00 | |
| 108_S | 150_P | 1.632 | 1.00 | |
| 7_K | 37_T | 1.631 | 1.00 | |
| 166_S | 170_A | 1.621 | 1.00 | |
| 53_P | 57_A | 1.603 | 1.00 | |
| 56_Q | 92_F | 1.556 | 1.00 | |
| 8_V | 64_V | 1.544 | 1.00 | |
| 57_A | 60_R | 1.538 | 1.00 | |
| 109_V | 151_I | 1.496 | 1.00 | |
| 26_L | 30_A | 1.489 | 1.00 | |
| 64_V | 107_R | 1.486 | 1.00 | |
| 29_P | 172_G | 1.475 | 1.00 | |
| 105_Y | 146_H | 1.472 | 1.00 | |
| 60_R | 92_F | 1.466 | 1.00 | |
| 112_T | 154_Y | 1.457 | 1.00 | |
| 47_D | 78_A | 1.445 | 1.00 | |
| 11_L | 39_H | 1.445 | 1.00 | |
| 74_Y | 142_M | 1.442 | 1.00 | |
| 15_P | 72_Y | 1.433 | 1.00 | |
| 169_R | 172_G | 1.429 | 1.00 | |
| 23_N | 68_Q | 1.414 | 1.00 | |
| 110_I | 152_I | 1.394 | 0.99 | |
| 160_S | 163_E | 1.391 | 0.99 | |
| 56_Q | 93_A | 1.334 | 0.99 | |
| 12_Y | 27_L | 1.331 | 0.99 | |
| 167_H | 170_A | 1.321 | 0.99 | |
| 12_Y | 38_V | 1.319 | 0.99 | |
| 65_I | 106_W | 1.319 | 0.99 | |
| 23_N | 111_T | 1.316 | 0.99 | |
| 88_L | 143_C | 1.302 | 0.99 | |
| 44_H | 58_L | 1.285 | 0.99 | |
| 76_C | 136_F | 1.279 | 0.99 | |
| 13_A | 42_Y | 1.265 | 0.99 | |
| 52_I | 56_Q | 1.264 | 0.99 | |
| 84_L | 88_L | 1.262 | 0.99 | |
| 101_L | 145_M | 1.261 | 0.99 | |
| 103_G | 146_H | 1.25 | 0.99 | |
| 78_A | 82_E | 1.249 | 0.99 | |
| 102_A | 144_R | 1.236 | 0.98 | |
| 163_E | 166_S | 1.223 | 0.98 | |
| 24_R | 28_K | 1.222 | 0.98 | |
| 10_L | 38_V | 1.222 | 0.98 | |
| 165_A | 169_R | 1.22 | 0.98 | |
| 69_H | 108_S | 1.206 | 0.98 | |
| 28_K | 32_Q | 1.205 | 0.98 | |
| 15_P | 79_L | 1.184 | 0.98 | |
| 164_L | 168_A | 1.165 | 0.97 | |
| 172_G | 176_A | 1.159 | 0.97 | |
| 116_E | 154_Y | 1.138 | 0.97 | |
| 29_P | 32_Q | 1.138 | 0.97 | |
| 13_A | 80_L | 1.114 | 0.96 | |
| 55_E | 83_W | 1.112 | 0.96 | |
| 62_H | 65_I | 1.105 | 0.96 | |
| 51_D | 54_R | 1.101 | 0.96 | |
| 128_P | 131_D | 1.098 | 0.96 | |
| 105_Y | 149_S | 1.098 | 0.96 | |
| 72_Y | 77_P | 1.091 | 0.96 | |
| 44_H | 54_R | 1.09 | 0.96 | |
| 39_H | 44_H | 1.082 | 0.96 | |
| 87_V | 143_C | 1.067 | 0.95 | |
| 26_L | 109_V | 1.048 | 0.94 | |
| 11_L | 67_F | 1.04 | 0.94 | |
| 69_H | 80_L | 1.04 | 0.94 | |
| 99_N | 144_R | 1.034 | 0.94 | |
| 59_L | 65_I | 1.031 | 0.94 | |
| 27_L | 38_V | 1.03 | 0.94 | |
| 161_A | 164_L | 1.028 | 0.94 | |
| 30_A | 171_Y | 1.026 | 0.94 | |
| 53_P | 89_S | 1.025 | 0.93 | |
| 67_F | 140_A | 1.008 | 0.93 | |
| 60_R | 100_Q | 1.008 | 0.93 | |
| 27_L | 30_A | 1.008 | 0.93 | |
| 30_A | 109_V | 1.007 | 0.93 | |
| 22_A | 26_L | 1.004 | 0.93 | |
| 169_R | 173_D | 1.004 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1d4aA | 4 | 0.9674 | 100 | 0.359 | Contact Map | 0.731 |
| 4gi5A | 2 | 0.9837 | 100 | 0.36 | Contact Map | 0.768 |
| 3l9wA | 2 | 0.9891 | 100 | 0.363 | Contact Map | 0.73 |
| 2amjA | 4 | 0.9402 | 100 | 0.396 | Contact Map | 0.746 |
| 3f2vA | 1 | 0.9783 | 100 | 0.404 | Contact Map | 0.687 |
| 3rpeA | 2 | 0.9457 | 100 | 0.415 | Contact Map | 0.742 |
| 4fglA | 4 | 0.9837 | 100 | 0.417 | Contact Map | 0.761 |
| 3ha2A | 2 | 0.9348 | 100 | 0.421 | Contact Map | 0.678 |
| 3r6wA | 2 | 0.9402 | 100 | 0.444 | Contact Map | 0.693 |
| 3lcmA | 4 | 0.9293 | 100 | 0.452 | Contact Map | 0.804 |
Sequence Conservation (Image Generated using WebLogo v3)