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OPENSEQ.org
CCMA - CCME
UniProt: P33931 - P69490
Length: 366
Sequences: 423
Seq/Len: 1.21
I_Prob: 0.00
CCMA - Cytochrome c biogenesis ATP-binding export protein CcmA
Paralog alert: 0.94 [within 20: 0.86] - ratio of genomes with paralogs
Cluster includes: ARTP BTUD CCMA CYSA DDPD DDPF DPPD DPPF FBPC FECE FEPC FHUC FTSE GLNQ GLTL HISP LIVF LIVG LOLD LPTB MALK METN MLAF MODC NIKD NIKE OPPD OPPF PHNC PHNK PHNL POTA POTG PROV PSTB SAPD SAPF SSUB SUFC TAUB THIQ UGPC YADG YBBA YBBL YCJV YDCT YECC YEHX YHDZ YNJD ZNUC 		CCME - Cytochrome c-type biogenesis protein CcmE
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: CCME
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
44_T 57_G 1.30 0.00
22_L 33_N 1.29 0.00
98_H 62_V 1.16 0.00
60_V 98_I 1.12 0.00
159_I 31_R 1.07 0.00
73_S 72_Q 1.04 0.00
162_N 62_V 1.02 0.00
182_I 20_A 1.02 0.00
87_I 39_T 1.01 0.00
24_F 143_M 1.00 0.00
202_T 84_I 0.99 0.00
149_L 26_V 0.98 0.00
131_A 107_Q 0.96 0.00
92_T 90_S 0.96 0.00
174_H 27_L 0.93 0.00
79_L 62_V 0.93 0.00
48_L 117_K 0.92 0.00
105_D 76_N 0.92 0.00
6_A 23_I 0.92 0.00
114_A 52_Q 0.91 0.00
184_T 5_R 0.90 0.00
182_I 45_Y 0.90 0.00
47_R 110_V 0.89 0.00
5_E 13_C 0.89 0.00
131_A 130_H 0.89 0.00
59_E 84_I 0.87 0.00
8_E 117_K 0.87 0.00
60_V 141_K 0.86 0.00
163_G 3_I 0.86 0.00
100_Y 60_L 0.85 0.00
6_A 32_S 0.84 0.00
137_V 34_I 0.84 0.00
161_V 13_C 0.84 0.00
195_K 13_C 0.84 0.00
168_T 135_T 0.83 0.00
135_R 131_D 0.83 0.00
99_F 42_E 0.82 0.00
135_R 130_H 0.82 0.00
6_A 140_E 0.82 0.00
173_Q 75_P 0.82 0.00
22_L 23_I 0.82 0.00
60_V 144_E 0.81 0.00
34_I 16_L 0.81 0.00
168_T 91_V 0.81 0.00
183_L 33_N 0.81 0.00
111_E 45_Y 0.81 0.00
202_T 81_T 0.81 0.00
131_A 131_D 0.80 0.00
197_R 19_L 0.80 0.00
151_I 89_G 0.80 0.00
86_G 130_H 0.79 0.00
172_A 19_L 0.79 0.00
185_T 7_N 0.78 0.00
26_L 16_L 0.78 0.00
28_A 90_S 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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