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OPENSEQ.org
CBRA - YCGM
UniProt: P31456 - P76004
Length: 573
Sequences: 568
Seq/Len: 1.10
I_Prob: 0.00
CBRA - Protein CbrA
Paralog alert: 0.83 [within 20: 0.32] - ratio of genomes with paralogs
Cluster includes: CBRA FIXC UBIF UBIH VISC YDIS YGCN 		YCGM - Uncharacterized protein YcgM
Paralog alert: 0.54 [within 20: 0.06] - ratio of genomes with paralogs
Cluster includes: YCGM
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
118_Y 93_I 1.09 0.00
271_I 154_G 1.04 0.00
161_V 173_I 0.94 0.00
152_V 161_T 0.94 0.00
109_S 34_G 0.93 0.00
152_V 91_K 0.90 0.00
230_L 69_H 0.88 0.00
311_Y 91_K 0.80 0.00
8_I 188_V 0.79 0.00
20_R 139_F 0.79 0.00
262_V 92_A 0.78 0.00
154_A 218_V 0.77 0.00
147_T 88_H 0.77 0.00
130_D 58_L 0.75 0.00
236_A 130_L 0.75 0.00
145_H 58_L 0.74 0.00
209_D 87_E 0.73 0.00
125_K 76_L 0.73 0.00
117_V 178_K 0.72 0.00
107_M 173_I 0.72 0.00
300_L 178_K 0.72 0.00
183_E 76_L 0.71 0.00
154_A 148_L 0.71 0.00
152_V 145_N 0.70 0.00
253_L 103_T 0.70 0.00
6_V 173_I 0.70 0.00
147_T 87_E 0.70 0.00
81_V 148_L 0.69 0.00
6_V 15_P 0.69 0.00
67_V 147_T 0.69 0.00
236_A 97_G 0.69 0.00
8_I 210_D 0.69 0.00
140_D 80_T 0.69 0.00
32_D 209_F 0.68 0.00
31_L 86_E 0.68 0.00
133_W 88_H 0.68 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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