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OPENSEQ.org

LSPA - RIMK
UniProt: P00804 - P0C0U4
Length: 464
Sequences: 332
Seq/Len: 0.76
I_Prob: 0.00

LSPA - Lipoprotein signal peptidase
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: LSPA
RIMK - Ribosomal protein S6 modification protein
Paralog alert: 0.95 [within 20: 0.52] - ratio of genomes with paralogs
Cluster includes: ACCC DDLA DDLB GSHB PUR2 PURK PURT RIMK
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
58_F 60_A 1.46 0.00
81_V 84_G 1.44 0.00
25_G 81_E 1.29 0.00
122_V 154_A 1.23 0.00
127_F 30_E 1.23 0.00
144_I 60_A 1.15 0.00
58_F 2_K 1.13 0.00
127_F 2_K 1.12 0.00
100_A 93_A 1.09 0.00
26_S 188_I 1.06 0.00
106_G 144_E 1.06 0.00
78_G 123_P 1.05 0.00
50_Y 114_L 1.04 0.00
81_V 111_G 1.03 0.00
99_I 124_D 1.02 0.00
159_S 128_D 1.02 0.00
42_L 86_Y 1.02 0.00
44_P 32_L 1.01 0.00
45_S 85_S 0.99 0.00
43_F 81_E 0.99 0.00
15_L 178_E 0.99 0.00
54_Y 111_G 0.99 0.00
46_L 30_E 0.99 0.00
79_I 14_S 0.97 0.00
124_M 153_L 0.97 0.00
134_F 239_T 0.97 0.00
100_A 161_E 0.96 0.00
93_T 124_D 0.96 0.00
116_L 131_D 0.94 0.00
44_P 20_E 0.94 0.00
86_M 157_R 0.94 0.00
102_A 133_V 0.93 0.00
45_S 140_V 0.93 0.00
15_L 127_S 0.93 0.00
59_S 95_A 0.93 0.00
104_I 176_V 0.92 0.00
17_V 133_V 0.91 0.00
85_V 81_E 0.91 0.00
106_G 44_A 0.91 0.00
48_L 153_L 0.90 0.00
28_Y 93_A 0.90 0.00
18_V 131_D 0.90 0.00
48_L 108_A 0.89 0.00
125_I 3_I 0.89 0.00
134_F 3_I 0.88 0.00
61_L 140_V 0.88 0.00
44_P 52_G 0.87 0.00
21_I 139_V 0.87 0.00
124_M 241_A 0.87 0.00
106_G 258_V 0.87 0.00
126_D 30_E 0.87 0.00
144_I 197_V 0.86 0.00
20_L 121_H 0.86 0.00
16_V 131_D 0.86 0.00
70_W 140_V 0.86 0.00
125_I 106_L 0.85 0.00
58_F 232_I 0.85 0.00
120_F 104_M 0.85 0.00
72_F 101_L 0.84 0.00
109_L 120_A 0.84 0.00
18_V 108_A 0.84 0.00
148_A 42_N 0.83 0.00
127_F 87_P 0.83 0.00
56_A 107_L 0.83 0.00
22_I 111_G 0.83 0.00
102_A 241_A 0.83 0.00
58_F 58_F 0.82 0.00
63_D 4_A 0.82 0.00
51_A 154_A 0.82 0.00
125_I 30_E 0.81 0.00
19_V 164_I 0.81 0.00
99_I 111_G 0.81 0.00
151_I 162_S 0.81 0.00
122_V 5_I 0.81 0.00
16_V 110_Q 0.81 0.00
101_Y 125_D 0.81 0.00
150_L 80_F 0.81 0.00
34_F 231_E 0.81 0.00
133_H 270_I 0.81 0.00
102_A 130_I 0.80 0.00
42_L 173_H 0.80 0.00
106_G 80_F 0.80 0.00
48_L 160_A 0.80 0.00
113_F 169_G 0.79 0.00
73_A 249_I 0.79 0.00
57_A 107_L 0.79 0.00
104_I 61_V 0.79 0.00
113_F 3_I 0.79 0.00
34_F 169_G 0.79 0.00
80_S 253_N 0.78 0.00
136_T 166_A 0.78 0.00
157_L 161_E 0.78 0.00
125_I 185_G 0.78 0.00
154_E 214_L 0.77 0.00
116_L 85_S 0.77 0.00
19_V 130_I 0.77 0.00
116_L 5_I 0.77 0.00
26_S 104_M 0.76 0.00
36_L 261_V 0.76 0.00
100_A 112_I 0.76 0.00
57_A 80_F 0.76 0.00
148_A 234_I 0.76 0.00
61_L 252_A 0.76 0.00
119_G 118_G 0.76 0.00
34_F 172_A 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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