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OPENSEQ.org

YBHG - YBHR
UniProt: P75777 - P0AFP9
Length: 700
Sequences: 932
Seq/Len: 1.35
I_Prob: 0.03

YBHG - UPF0194 membrane protein YbhG
Paralog alert: 0.80 [within 20: 0.13] - ratio of genomes with paralogs
Cluster includes: AAEA ACRA ACRE EMRA EMRK MACA MDTA MDTE MDTN YBHG YDHJ YHII YIAV YIBH
YBHR - Inner membrane transport permease YbhR
Paralog alert: 0.78 [within 20: 0.45] - ratio of genomes with paralogs
Cluster includes: YBHR YBHS YHHJ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
72_L 246_Q 1.39 0.03
289_K 307_N 1.13 0.01
249_E 301_Y 1.13 0.01
209_A 101_F 1.09 0.01
209_A 107_R 1.03 0.01
128_Q 94_K 1.03 0.01
304_L 47_N 1.02 0.01
128_Q 31_L 1.01 0.01
226_L 335_D 0.98 0.01
67_K 277_L 0.97 0.01
67_K 88_P 0.95 0.01
143_I 354_T 0.94 0.01
321_V 45_V 0.94 0.01
168_K 274_I 0.94 0.01
224_T 304_P 0.93 0.01
320_P 245_Y 0.92 0.01
88_K 17_L 0.89 0.01
315_L 248_P 0.89 0.01
72_L 159_L 0.88 0.01
236_S 229_V 0.88 0.01
90_G 49_T 0.88 0.01
135_Q 249_F 0.88 0.01
82_I 266_S 0.87 0.01
187_S 31_L 0.87 0.01
60_V 141_K 0.87 0.01
304_L 323_H 0.86 0.01
38_G 293_M 0.86 0.01
229_G 54_D 0.86 0.01
118_K 85_E 0.86 0.01
235_V 39_F 0.86 0.01
115_A 186_I 0.85 0.01
242_W 174_F 0.85 0.01
317_Q 62_V 0.85 0.01
280_V 324_F 0.85 0.01
270_D 151_K 0.84 0.01
95_Q 339_D 0.84 0.01
114_A 31_L 0.84 0.01
98_Y 230_A 0.83 0.01
68_A 254_A 0.83 0.01
172_Y 193_S 0.83 0.01
237_L 304_P 0.83 0.01
71_V 216_W 0.83 0.01
215_L 219_F 0.82 0.01
16_A 244_A 0.82 0.01
55_V 319_N 0.82 0.01
203_Q 90_I 0.82 0.01
209_A 105_F 0.82 0.01
111_A 239_A 0.82 0.01
128_Q 153_K 0.82 0.01
226_L 196_V 0.82 0.01
167_D 193_S 0.81 0.01
64_D 179_L 0.81 0.01
16_A 77_V 0.81 0.01
48_S 62_V 0.81 0.01
136_G 337_S 0.81 0.01
287_T 171_Y 0.81 0.01
225_V 129_A 0.80 0.01
124_Y 327_I 0.80 0.01
212_D 339_D 0.80 0.01
213_G 2_F 0.80 0.01
247_V 355_T 0.80 0.01
51_V 328_T 0.79 0.01
143_I 345_L 0.79 0.01
128_Q 353_A 0.79 0.01
68_A 343_N 0.79 0.01
260_K 258_F 0.79 0.01
67_K 85_E 0.79 0.01
320_P 11_K 0.79 0.01
55_V 145_Q 0.79 0.01
320_P 217_Q 0.79 0.01
67_K 114_T 0.79 0.00
252_L 303_S 0.79 0.00
67_K 232_F 0.78 0.00
70_Q 235_T 0.78 0.00
297_R 177_P 0.78 0.00
80_Y 316_T 0.78 0.00
55_V 49_T 0.78 0.00
302_Y 220_I 0.78 0.00
301_V 204_T 0.78 0.00
235_V 67_R 0.78 0.00
191_A 258_F 0.78 0.00
167_D 321_I 0.78 0.00
96_A 156_N 0.78 0.00
263_L 220_I 0.78 0.00
111_A 16_L 0.77 0.00
306_I 165_Y 0.77 0.00
298_T 175_V 0.77 0.00
142_T 167_P 0.77 0.00
49_F 109_L 0.77 0.00
68_A 90_I 0.77 0.00
88_K 170_D 0.77 0.00
83_A 280_T 0.77 0.00
73_G 347_P 0.77 0.00
48_S 245_Y 0.77 0.00
215_L 350_V 0.77 0.00
241_V 167_P 0.76 0.00
151_A 345_L 0.76 0.00
277_I 355_T 0.76 0.00
186_A 274_I 0.76 0.00
192_Q 318_I 0.76 0.00
70_Q 257_Y 0.76 0.00
281_S 272_L 0.76 0.00
195_L 318_I 0.76 0.00
73_G 94_K 0.76 0.00
58_L 260_M 0.75 0.00
301_V 35_I 0.75 0.00
277_I 219_F 0.75 0.00
191_A 48_A 0.75 0.00
92_S 85_E 0.75 0.00
56_E 364_R 0.75 0.00
93_V 132_A 0.74 0.00
71_V 318_I 0.74 0.00
281_S 199_E 0.74 0.00
85_M 216_W 0.74 0.00
282_P 173_W 0.74 0.00
68_A 349_L 0.74 0.00
13_V 52_I 0.74 0.00
128_Q 52_I 0.74 0.00
37_Y 307_N 0.74 0.00
159_Q 244_A 0.74 0.00
96_A 101_F 0.74 0.00
238_T 221_G 0.73 0.00
305_R 80_L 0.73 0.00
212_D 253_L 0.73 0.00
196_A 32_I 0.73 0.00
222_P 99_V 0.73 0.00
215_L 223_A 0.73 0.00
129_N 99_V 0.73 0.00
274_H 213_L 0.73 0.00
132_N 158_E 0.73 0.00
159_Q 92_T 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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