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OPENSEQ.org

RIDA - YCAC
UniProt: P0AF93 - P21367
Length: 336
Sequences: 202
Seq/Len: 0.64
I_Prob: 0.00

RIDA - Enamine/imine deaminase
Paralog alert: 0.59 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: RIDA RUTC TDCF YJGH YOAB
YCAC - Uncharacterized protein YcaC
Paralog alert: 0.66 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: PNCA RUTB YCAC YECD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
82_N 82_I 1.22 0.00
55_D 78_D 1.10 0.00
18_V 35_K 1.08 0.00
20_G 147_T 1.07 0.00
27_I 119_V 1.03 0.00
86_T 119_V 1.01 0.00
89_A 42_A 1.00 0.00
121_I 47_A 1.00 0.00
48_A 166_F 0.98 0.00
57_V 70_P 0.97 0.00
77_F 172_L 0.97 0.00
27_I 54_T 0.97 0.00
65_G 101_K 0.96 0.00
34_P 34_D 0.94 0.00
119_I 171_E 0.93 0.00
20_G 83_A 0.92 0.00
27_I 12_D 0.92 0.00
119_I 43_L 0.91 0.00
119_I 7_R 0.91 0.00
61_V 41_L 0.90 0.00
64_A 151_A 0.90 0.00
82_N 107_Q 0.89 0.00
87_V 9_D 0.89 0.00
68_V 166_F 0.88 0.00
27_I 111_A 0.86 0.00
119_I 12_D 0.85 0.00
63_A 39_N 0.84 0.00
36_N 82_I 0.84 0.00
75_T 106_K 0.83 0.00
69_G 42_A 0.83 0.00
118_K 83_A 0.83 0.00
31_G 17_L 0.83 0.00
108_V 25_L 0.81 0.00
78_V 10_K 0.81 0.00
71_I 52_L 0.80 0.00
123_A 126_A 0.80 0.00
113_L 151_A 0.79 0.00
47_A 167_G 0.78 0.00
35_V 57_T 0.78 0.00
51_R 20_H 0.77 0.00
107_C 144_N 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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