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OPENSEQ.org

ATKA - UHPA
UniProt: P03959 - P0AGA6
Length: 753
Sequences: 457
Seq/Len: 0.61
I_Prob: 0.00

ATKA - Potassium-transporting ATPase A chain
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ATKA
UHPA - Transcriptional regulatory protein UhpA
Paralog alert: 0.94 [within 20: 0.58] - ratio of genomes with paralogs
Cluster includes: ARCA BAER BASR BGLJ CPXR CREB CSGD CUSR DCUR DPIA EVGA FIMZ KDPE NARL NARP OMPR PHOB PHOP QSEB RCSB RSTA TORR UHPA UVRY YEDW YGEK YHJB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
197_N 118_G 1.34 0.00
57_M 8_D 1.01 0.00
7_L 150_A 1.00 0.00
213_L 158_I 0.98 0.00
453_F 69_L 0.96 0.00
533_G 4_V 0.95 0.00
27_L 49_Q 0.93 0.00
237_N 17_F 0.92 0.00
83_G 75_T 0.92 0.00
259_I 10_H 0.91 0.00
207_V 146_A 0.87 0.00
126_Y 162_L 0.87 0.00
414_M 173_R 0.86 0.00
453_F 8_D 0.86 0.00
536_L 112_V 0.85 0.00
498_I 68_Q 0.84 0.00
248_T 88_E 0.84 0.00
85_H 51_C 0.84 0.00
195_L 174_A 0.83 0.00
497_I 8_D 0.82 0.00
346_A 7_I 0.82 0.00
17_M 64_E 0.82 0.00
163_L 135_Q 0.81 0.00
549_L 52_I 0.81 0.00
132_G 6_L 0.80 0.00
434_L 7_I 0.80 0.00
21_R 158_I 0.80 0.00
197_N 86_L 0.80 0.00
152_I 52_I 0.80 0.00
441_G 171_V 0.80 0.00
10_A 52_I 0.80 0.00
22_P 76_I 0.80 0.00
398_I 118_G 0.79 0.00
330_L 158_I 0.78 0.00
349_A 104_S 0.78 0.00
12_F 75_T 0.78 0.00
163_L 75_T 0.78 0.00
442_R 180_L 0.77 0.00
67_L 4_V 0.77 0.00
261_L 139_T 0.77 0.00
103_L 48_V 0.77 0.00
367_Q 65_L 0.76 0.00
390_A 60_I 0.76 0.00
107_V 128_I 0.76 0.00
424_T 118_G 0.76 0.00
190_I 153_M 0.76 0.00
261_L 51_C 0.76 0.00
460_V 112_V 0.76 0.00
390_A 33_F 0.75 0.00
189_F 160_A 0.75 0.00
96_G 75_T 0.75 0.00
432_A 140_K 0.75 0.00
16_L 60_I 0.75 0.00
278_R 124_P 0.75 0.00
531_L 139_T 0.74 0.00
26_G 27_L 0.74 0.00
174_T 131_A 0.74 0.00
22_P 158_I 0.74 0.00
7_L 36_G 0.74 0.00
131_A 40_L 0.74 0.00
22_P 96_R 0.73 0.00
249_A 39_A 0.73 0.00
263_P 139_T 0.73 0.00
127_F 105_P 0.73 0.00
289_V 136_D 0.73 0.00
413_E 153_M 0.73 0.00
260_F 43_L 0.73 0.00
372_V 131_A 0.73 0.00
380_L 4_V 0.72 0.00
535_V 161_E 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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