May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

COBC - CSPE
UniProt: P52086 - P0A972
Length: 272
Sequences: 204
Seq/Len: 0.77
I_Prob: 0.00

COBC - Alpha-ribazole phosphatase
Paralog alert: 0.82 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: COBC GPMA GPMB
CSPE - Cold shock-like protein CspE
Paralog alert: 0.77 [within 20: 0.16] - ratio of genomes with paralogs
Cluster includes: CSPA CSPB CSPC CSPD CSPE CSPF CSPG CSPH CSPI
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
98_E 29_V 1.26 0.00
28_T 10_W 1.21 0.00
49_L 64_A 1.19 0.00
55_L 15_K 1.18 0.00
166_E 53_E 1.10 0.00
58_A 66_V 1.09 0.00
31_G 10_W 1.07 0.00
182_D 17_F 1.07 0.00
153_L 48_Q 1.04 0.00
153_L 17_F 1.03 0.00
124_F 41_F 0.99 0.00
148_S 17_F 0.99 0.00
26_P 13_E 0.98 0.00
9_G 53_E 0.96 0.00
35_A 34_S 0.95 0.00
141_Y 24_D 0.94 0.00
134_R 43_T 0.90 0.00
36_Q 23_E 0.90 0.00
93_R 11_F 0.89 0.00
76_I 56_N 0.89 0.00
101_E 17_F 0.88 0.00
87_W 51_E 0.88 0.00
182_D 7_N 0.87 0.00
33_E 31_V 0.86 0.00
21_G 35_A 0.85 0.00
10_E 59_K 0.85 0.00
31_G 46_E 0.84 0.00
143_N 64_A 0.84 0.00
67_S 12_N 0.83 0.00
31_G 28_D 0.83 0.00
52_C 55_T 0.83 0.00
155_L 67_I 0.82 0.00
120_G 54_I 0.82 0.00
100_A 42_K 0.82 0.00
105_A 7_N 0.82 0.00
6_I 4_I 0.81 0.00
76_I 55_T 0.81 0.00
49_L 53_E 0.81 0.00
47_F 21_T 0.81 0.00
6_I 7_N 0.80 0.00
33_E 66_V 0.80 0.00
95_L 54_I 0.79 0.00
88_E 57_G 0.79 0.00
80_N 11_F 0.79 0.00
65_V 69_L 0.79 0.00
132_I 52_F 0.79 0.00
6_I 69_L 0.78 0.00
30_R 51_E 0.78 0.00
126_Q 5_K 0.78 0.00
121_F 23_E 0.78 0.00
151_G 25_G 0.78 0.00
87_W 17_F 0.77 0.00
88_E 27_K 0.77 0.00
124_F 42_K 0.76 0.00
77_P 35_A 0.76 0.00
122_Q 58_A 0.76 0.00
44_G 39_N 0.75 0.00
28_T 28_D 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.1171 seconds.