| UniProt: | P0A978 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG14243 | ||
| Length: | 70 (67) | ||
| Sequences: | 2982 | ||
| Seq/Len: | 44.51 |
| CSPG
Paralog alert: 0.78 [within 20: 0.16] - ratio of genomes with paralogs Cluster includes: CSPA CSPB CSPC CSPD CSPE CSPF CSPG CSPH CSPI |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 32_V | 67_V | 3.883 | 1.00 | |
| 56_E | 65_A | 3.858 | 1.00 | |
| 54_S | 66_N | 2.876 | 1.00 | |
| 49_Q | 69_T | 2.375 | 1.00 | |
| 8_L | 50_K | 2.242 | 1.00 | |
| 24_D | 50_K | 2.177 | 1.00 | |
| 52_E | 68_V | 2.176 | 1.00 | |
| 14_A | 46_N | 2.123 | 1.00 | |
| 6_T | 52_E | 2.022 | 1.00 | |
| 6_T | 50_K | 1.814 | 1.00 | |
| 38_Q | 66_N | 1.794 | 1.00 | |
| 36_A | 65_A | 1.739 | 1.00 | |
| 52_E | 70_L | 1.65 | 1.00 | |
| 23_P | 53_F | 1.642 | 1.00 | |
| 57_Q | 62_P | 1.635 | 1.00 | |
| 58_G | 63_A | 1.635 | 1.00 | |
| 23_P | 26_G | 1.629 | 1.00 | |
| 5_M | 23_P | 1.617 | 1.00 | |
| 23_P | 27_S | 1.607 | 1.00 | |
| 64_A | 67_V | 1.603 | 1.00 | |
| 32_V | 45_L | 1.508 | 1.00 | |
| 50_K | 70_L | 1.393 | 0.99 | |
| 14_A | 44_T | 1.37 | 0.99 | |
| 38_Q | 68_V | 1.365 | 0.99 | |
| 12_F | 34_F | 1.301 | 0.99 | |
| 23_P | 28_K | 1.282 | 0.99 | |
| 34_F | 37_I | 1.226 | 0.98 | |
| 6_T | 24_D | 1.184 | 0.98 | |
| 14_A | 42_F | 1.182 | 0.98 | |
| 39_S | 69_T | 1.18 | 0.98 | |
| 46_N | 49_Q | 1.161 | 0.97 | |
| 34_F | 43_R | 1.126 | 0.97 | |
| 8_L | 22_T | 1.11 | 0.96 | |
| 30_V | 55_I | 1.038 | 0.94 | |
| 55_I | 62_P | 1.024 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2lssA | 1 | 1 | 99.9 | 0.097 | Contact Map | 0.613 |
| 3camA | 2 | 0.9571 | 99.9 | 0.106 | Contact Map | 0.87 |
| 3i2zB | 2 | 1 | 99.9 | 0.113 | Contact Map | 0.916 |
| 1h95A | 1 | 1 | 99.9 | 0.122 | Contact Map | 0.587 |
| 1c9oA | 2 | 0.9429 | 99.8 | 0.127 | Contact Map | 0.879 |
| 2lxjA | 1 | 0.9429 | 99.8 | 0.128 | Contact Map | 0.556 |
| 3a0jA | 2 | 0.9429 | 99.8 | 0.142 | Contact Map | 0.835 |
| 1g6pA | 1 | 0.9286 | 99.8 | 0.143 | Contact Map | 0.507 |
| 2kcmA | 1 | 0.9286 | 99.8 | 0.149 | Contact Map | 0.504 |
| 3uljA | 2 | 1 | 99.8 | 0.156 | Contact Map | 0.801 |
Sequence Conservation (Image Generated using WebLogo v3)