| UniProt: | P0A7A2 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12164 | ||
| Length: | 215 (201) | ||
| Sequences: | 6205 | ||
| Seq/Len: | 30.87 |
| GPMB
Paralog alert: 0.80 [within 20: 0.07] - ratio of genomes with paralogs Cluster includes: COBC GPMA GPMB |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 33_E | 61_R | 3.18 | 1.00 | |
| 11_E | 31_K | 3.15 | 1.00 | |
| 87_V | 118_E | 3.018 | 1.00 | |
| 55_D | 81_R | 2.996 | 1.00 | |
| 79_R | 135_S | 2.901 | 1.00 | |
| 79_R | 131_A | 2.632 | 1.00 | |
| 3_Q | 181_R | 2.428 | 1.00 | |
| 60_R | 76_F | 2.413 | 1.00 | |
| 50_H | 75_I | 2.322 | 1.00 | |
| 37_M | 65_I | 2.242 | 1.00 | |
| 130_N | 160_T | 2.215 | 1.00 | |
| 27_P | 57_G | 2.201 | 1.00 | |
| 79_R | 132_A | 2.197 | 1.00 | |
| 51_I | 63_A | 2.132 | 1.00 | |
| 129_V | 153_A | 2.122 | 1.00 | |
| 149_S | 153_A | 2.1 | 1.00 | |
| 33_E | 65_I | 2.094 | 1.00 | |
| 91_R | 99_E | 2.075 | 1.00 | |
| 7_V | 66_I | 2.061 | 1.00 | |
| 61_R | 64_E | 2.045 | 1.00 | |
| 3_Q | 144_R | 2.044 | 1.00 | |
| 7_V | 39_V | 2.008 | 1.00 | |
| 27_P | 61_R | 1.977 | 1.00 | |
| 11_E | 29_T | 1.963 | 1.00 | |
| 7_V | 146_L | 1.871 | 1.00 | |
| 80_L | 132_A | 1.87 | 1.00 | |
| 5_Y | 48_I | 1.852 | 1.00 | |
| 30_A | 33_E | 1.819 | 1.00 | |
| 13_Q | 29_T | 1.816 | 1.00 | |
| 3_Q | 183_D | 1.802 | 1.00 | |
| 51_I | 67_A | 1.792 | 1.00 | |
| 49_T | 143_S | 1.779 | 1.00 | |
| 121_S | 124_E | 1.776 | 1.00 | |
| 13_Q | 17_E | 1.738 | 1.00 | |
| 48_I | 146_L | 1.73 | 1.00 | |
| 120_E | 128_R | 1.721 | 1.00 | |
| 36_A | 62_T | 1.675 | 1.00 | |
| 60_R | 64_E | 1.626 | 1.00 | |
| 23_Q | 81_R | 1.624 | 1.00 | |
| 23_Q | 84_N | 1.623 | 1.00 | |
| 33_E | 37_M | 1.61 | 1.00 | |
| 41_T | 69_A | 1.57 | 1.00 | |
| 55_D | 78_S | 1.547 | 1.00 | |
| 149_S | 154_L | 1.538 | 1.00 | |
| 66_I | 148_V | 1.526 | 1.00 | |
| 34_Q | 37_M | 1.51 | 1.00 | |
| 124_E | 127_D | 1.497 | 1.00 | |
| 49_T | 144_R | 1.492 | 1.00 | |
| 50_H | 143_S | 1.491 | 1.00 | |
| 154_L | 174_L | 1.485 | 1.00 | |
| 92_H | 95_S | 1.465 | 1.00 | |
| 115_R | 124_E | 1.462 | 1.00 | |
| 53_S | 76_F | 1.435 | 1.00 | |
| 5_Y | 144_R | 1.427 | 1.00 | |
| 34_Q | 38_Q | 1.423 | 1.00 | |
| 196_V | 199_A | 1.421 | 1.00 | |
| 52_I | 132_A | 1.414 | 1.00 | |
| 31_K | 34_Q | 1.412 | 1.00 | |
| 77_D | 132_A | 1.36 | 0.99 | |
| 14_W | 19_R | 1.356 | 0.99 | |
| 123_Q | 127_D | 1.349 | 0.99 | |
| 84_N | 89_E | 1.331 | 0.99 | |
| 183_D | 197_E | 1.329 | 0.99 | |
| 198_T | 201_D | 1.303 | 0.99 | |
| 14_W | 21_Q | 1.301 | 0.99 | |
| 15_N | 176_N | 1.297 | 0.99 | |
| 41_T | 44_K | 1.289 | 0.99 | |
| 130_N | 134_E | 1.286 | 0.99 | |
| 31_K | 35_Q | 1.276 | 0.99 | |
| 129_V | 157_L | 1.254 | 0.99 | |
| 37_M | 68_Q | 1.254 | 0.99 | |
| 11_E | 16_A | 1.249 | 0.99 | |
| 5_Y | 181_R | 1.243 | 0.98 | |
| 77_D | 135_S | 1.23 | 0.98 | |
| 12_T | 21_Q | 1.218 | 0.98 | |
| 38_Q | 41_T | 1.206 | 0.98 | |
| 91_R | 95_S | 1.196 | 0.98 | |
| 42_R | 201_D | 1.183 | 0.98 | |
| 110_G | 113_D | 1.177 | 0.98 | |
| 175_R | 200_G | 1.177 | 0.98 | |
| 52_I | 140_P | 1.172 | 0.98 | |
| 29_T | 32_G | 1.169 | 0.97 | |
| 24_S | 89_E | 1.154 | 0.97 | |
| 181_R | 198_T | 1.148 | 0.97 | |
| 30_A | 34_Q | 1.14 | 0.97 | |
| 21_Q | 26_S | 1.135 | 0.97 | |
| 64_E | 68_Q | 1.111 | 0.96 | |
| 52_I | 75_I | 1.107 | 0.96 | |
| 6_L | 154_L | 1.104 | 0.96 | |
| 125_L | 153_A | 1.1 | 0.96 | |
| 54_S | 150_H | 1.094 | 0.96 | |
| 12_T | 176_N | 1.087 | 0.96 | |
| 88_L | 96_L | 1.084 | 0.96 | |
| 132_A | 147_L | 1.076 | 0.95 | |
| 10_G | 28_L | 1.065 | 0.95 | |
| 80_L | 147_L | 1.065 | 0.95 | |
| 53_S | 74_I | 1.06 | 0.95 | |
| 105_R | 109_N | 1.059 | 0.95 | |
| 53_S | 60_R | 1.035 | 0.94 | |
| 14_W | 26_S | 1.033 | 0.94 | |
| 23_Q | 55_D | 1.032 | 0.94 | |
| 35_Q | 176_N | 1.017 | 0.93 | |
| 40_A | 65_I | 1.009 | 0.93 | |
| 7_V | 179_I | 1.006 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4ij5A | 2 | 0.9721 | 100 | 0.126 | Contact Map | 0.829 |
| 1h2eA | 1 | 0.9535 | 100 | 0.144 | Contact Map | 0.806 |
| 3gp3A | 4 | 0.9814 | 100 | 0.169 | Contact Map | 0.804 |
| 1e58A | 1 | 0.9814 | 100 | 0.174 | Contact Map | 0.739 |
| 3d8hA | 2 | 0.9814 | 100 | 0.181 | Contact Map | 0.795 |
| 3kkkA | 4 | 0.9814 | 100 | 0.181 | Contact Map | 0.84 |
| 4embA | 4 | 0.9721 | 100 | 0.182 | Contact Map | 0.746 |
| 4gpzA | 2 | 0.9767 | 100 | 0.194 | Contact Map | 0.816 |
| 2hhjA | 2 | 0.9767 | 100 | 0.198 | Contact Map | 0.766 |
| 3r7aA | 2 | 0.9349 | 100 | 0.2 | Contact Map | 0.751 |
Sequence Conservation (Image Generated using WebLogo v3)