| UniProt: | P0A986 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13877 | ||
| Length: | 70 (67) | ||
| Sequences: | 3000 | ||
| Seq/Len: | 44.78 |
| CSPI
Paralog alert: 0.78 [within 20: 0.16] - ratio of genomes with paralogs Cluster includes: CSPA CSPB CSPC CSPD CSPE CSPF CSPG CSPH CSPI |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 32_V | 67_V | 3.951 | 1.00 | |
| 56_E | 65_V | 3.715 | 1.00 | |
| 54_G | 66_H | 2.707 | 1.00 | |
| 49_Q | 69_A | 2.458 | 1.00 | |
| 8_L | 50_E | 2.291 | 1.00 | |
| 24_K | 50_E | 2.227 | 1.00 | |
| 14_P | 46_T | 2.129 | 1.00 | |
| 6_T | 52_E | 2.075 | 1.00 | |
| 52_E | 68_V | 1.955 | 1.00 | |
| 38_Q | 66_H | 1.869 | 1.00 | |
| 57_N | 62_P | 1.856 | 1.00 | |
| 52_E | 70_L | 1.835 | 1.00 | |
| 36_A | 65_V | 1.828 | 1.00 | |
| 6_T | 50_E | 1.767 | 1.00 | |
| 64_A | 67_V | 1.685 | 1.00 | |
| 23_P | 53_F | 1.658 | 1.00 | |
| 58_G | 63_A | 1.588 | 1.00 | |
| 23_P | 27_S | 1.554 | 1.00 | |
| 23_P | 26_G | 1.542 | 1.00 | |
| 50_E | 70_L | 1.541 | 1.00 | |
| 5_M | 23_P | 1.539 | 1.00 | |
| 32_V | 45_L | 1.474 | 1.00 | |
| 14_P | 44_T | 1.378 | 0.99 | |
| 38_Q | 68_V | 1.376 | 0.99 | |
| 23_P | 28_K | 1.292 | 0.99 | |
| 12_F | 34_F | 1.284 | 0.99 | |
| 34_F | 37_I | 1.251 | 0.99 | |
| 6_T | 24_K | 1.22 | 0.98 | |
| 39_S | 69_A | 1.212 | 0.98 | |
| 46_T | 49_Q | 1.208 | 0.98 | |
| 14_P | 42_F | 1.189 | 0.98 | |
| 8_L | 22_T | 1.165 | 0.97 | |
| 34_F | 43_K | 1.081 | 0.95 | |
| 36_A | 56_E | 1.032 | 0.94 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2lssA | 1 | 1 | 99.9 | 0.105 | Contact Map | 0.588 |
| 3camA | 2 | 0.9571 | 99.9 | 0.116 | Contact Map | 0.853 |
| 3i2zB | 2 | 1 | 99.9 | 0.12 | Contact Map | 0.899 |
| 1h95A | 1 | 1 | 99.9 | 0.132 | Contact Map | 0.555 |
| 2lxjA | 1 | 0.9429 | 99.9 | 0.136 | Contact Map | 0.523 |
| 1c9oA | 2 | 0.9429 | 99.9 | 0.136 | Contact Map | 0.859 |
| 3a0jA | 2 | 0.9429 | 99.8 | 0.151 | Contact Map | 0.817 |
| 1g6pA | 1 | 0.9286 | 99.8 | 0.153 | Contact Map | 0.478 |
| 2kcmA | 1 | 0.9286 | 99.8 | 0.16 | Contact Map | 0.502 |
| 3uljA | 2 | 0.9714 | 99.8 | 0.167 | Contact Map | 0.779 |
Sequence Conservation (Image Generated using WebLogo v3)