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OPENSEQ.org

DBHA - ULAD
UniProt: P0ACF0 - P39304
Length: 306
Sequences: 191
Seq/Len: 0.68
I_Prob: 0.00

DBHA - DNA-binding protein HU-alpha
Paralog alert: 0.56 [within 20: 0.04] - ratio of genomes with paralogs
Cluster includes: DBHA DBHB IHFA IHFB
ULAD - 3-keto-L-gulonate-6-phosphate decarboxylase UlaD
Paralog alert: 0.49 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PYRF SGBH ULAD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
21_A 52_A 1.19 0.00
88_A 101_V 1.17 0.00
87_D 100_D 1.15 0.00
64_Q 169_T 1.12 0.00
24_A 20_E 1.12 0.00
70_K 6_L 1.09 0.00
56_A 73_S 1.08 0.00
56_A 74_R 1.02 0.00
65_T 128_A 1.00 0.00
33_T 21_T 0.97 0.00
85_L 10_L 0.97 0.00
38_E 52_A 0.96 0.00
17_S 23_R 0.96 0.00
81_S 5_M 0.96 0.00
37_K 92_I 0.96 0.00
85_L 204_A 0.96 0.00
15_E 201_V 0.94 0.00
27_S 38_L 0.92 0.00
57_E 168_V 0.88 0.00
81_S 85_T 0.87 0.00
89_V 27_E 0.87 0.00
89_V 59_V 0.86 0.00
65_T 185_I 0.85 0.00
80_V 71_I 0.85 0.00
18_K 211_I 0.85 0.00
81_S 211_I 0.85 0.00
49_T 80_N 0.85 0.00
39_G 97_G 0.84 0.00
72_A 38_L 0.84 0.00
12_E 53_L 0.84 0.00
27_S 175_E 0.83 0.00
68_E 114_T 0.83 0.00
40_D 7_Q 0.83 0.00
68_E 95_A 0.83 0.00
88_A 47_V 0.82 0.00
73_A 41_G 0.82 0.00
14_A 127_D 0.82 0.00
14_A 4_P 0.81 0.00
19_T 96_K 0.81 0.00
14_A 157_K 0.81 0.00
85_L 207_F 0.80 0.00
16_L 135_Y 0.79 0.00
12_E 7_Q 0.78 0.00
42_V 79_A 0.78 0.00
72_A 4_P 0.78 0.00
54_H 159_L 0.77 0.00
20_Q 73_S 0.77 0.00
5_Q 159_L 0.77 0.00
81_S 156_I 0.76 0.00
33_T 42_E 0.76 0.00
59_T 105_F 0.76 0.00
72_A 73_S 0.76 0.00
28_T 160_S 0.76 0.00
39_G 178_P 0.75 0.00
56_A 185_I 0.75 0.00
10_I 115_G 0.74 0.00
29_L 98_A 0.74 0.00
49_T 169_T 0.74 0.00
27_S 99_L 0.74 0.00
6_L 188_F 0.74 0.00
23_A 38_L 0.74 0.00
12_E 127_D 0.73 0.00
21_A 158_R 0.73 0.00
10_I 38_L 0.73 0.00
68_E 115_G 0.73 0.00
88_A 210_S 0.73 0.00
15_E 24_L 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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