May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

mep50 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [L:0095] and [L:0105]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.3 0.9 1.3 1.4 1.1 -0.2 0.6 -0.5 -0.3 -0.8 -0.9 -0.3 -0.6 -0.8 -0.3 -1 0.2 -0.5 0 -0.4
F 0.3 -0.3 -0.2 -0.9 0 0.4 -0.9 -0.6 0.3 1.4 0.1 0.4 0.1 0.3 0 0.3 -0.4 0.3 0.2 1.3
I 0.3 0.6 0.4 0.5 0.4 0.5 0.1 0.1 -0.2 -0.1 0.2 -0.2 -0.6 0 0.2 0.7 0.2 -0.5 -0.4 -0.6
L 0.6 -0.1 0.5 0.7 0.4 0.5 0 0.1 -0.3 0 -0.2 -0.1 -0.3 0.1 -0.2 0.3 -0.1 0.8 -0.5 0.1
V 0.5 0.6 0.5 0.7 1 0.4 0.3 0.1 -0.9 0 -0.1 0 -0.5 -0.9 -0.2 0.2 0.5 -0.2 -0.1 -0.6
M 0.2 -0.1 0.5 0.5 0.2 0.6 -0.1 0.6 -0.1 -0.2 -0.4 -0.3 -0.1 -0.3 0.3 -0.2 -0.3 -0.1 -0.1 0.3
W -0.4 -0.3 -0.5 -0.5 -1 -0.1 -0.1 1.5 -0.1 -0.2 -0.2 0.5 0.1 -0.1 0.1 0.2 0.9 -0.1 0 0.4
Y 0.9 -1 -0.9 -1.1 -0.2 -0.6 -0.1 -0.7 -0.3 0.7 1.1 0.7 0.4 0.8 0.3 1 -0.7 0.5 -0.2 0.4
D -0.1 -0.2 -0.3 -0.1 0.1 -0.1 0 0.2 0 -0.1 0 -0.1 0.2 0 -0.1 -0.1 -0.1 0 0 -0.1
E -0.1 -0.1 -0.2 0.1 -0.2 -0.1 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0
K -0.1 -0.1 0.1 -0.3 -0.4 -0.1 0 -0.1 0 -0.1 0.2 -0.1 0 0 -0.1 -0.1 0.2 0 0 -0.1
R -0.2 -0.1 0.1 0.3 -0.3 -0.1 0 -0.1 0 -0.1 -0.1 0.4 -0.1 0 -0.1 -0.1 -0.1 -0.1 0 -0.1
H 0.1 -0.1 -0.1 -0.2 -0.2 -0.1 0 -0.1 0 -0.1 0 -0.1 0 0 -0.1 -0.1 0.2 0 0 -0.1
N -0.1 -0.2 -0.1 -0.1 0 -0.1 0 -0.1 0 -0.1 0 -0.1 0 0.2 -0.1 -0.1 -0.1 0 0 -0.1
Q 0.1 0.1 -0.4 0 -0.2 -0.1 0 -0.1 0 -0.1 -0.1 0.1 0 0 -0.1 0.2 0.1 0 0 -0.1
S -0.2 0.1 -0.2 -0.6 -0.1 -0.1 -0.1 0.1 0.2 -0.3 -0.2 0.4 0.3 -0.1 0.9 -0.1 0.2 0.1 0 -0.1
T -0.2 0.5 0.3 -0.2 0 -0.5 -0.1 -0.2 0 -0.2 0.4 -0.4 0.9 0.1 0.2 -0.1 -0.1 -0.1 0 -0.2
G -0.2 -0.2 -0.2 0.3 0.2 -0.3 -0.1 0 0 0.3 0.1 0 0.1 -0.1 -0.2 -0.2 0 -0.1 0 -0.2
P 0 -0.2 -0.2 0.1 -0.1 -0.1 0 -0.1 0 -0.1 0 -0.1 0 0 -0.1 -0.1 0.1 0 0.2 -0.1
C -0.8 0.5 0.6 0.8 0.5 -0.2 0 -0.1 0.1 -0.3 -0.3 -0.6 0.3 0 0 -0.4 -0.4 -0.3 -0.1 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0095 0.2 1.4 2 2.5 1.8 0.7 -0.2 0.6 -1.1 -1.4 -1.1 -0.6 -1.2 -1.1 -1 -0.1 -0.2 -0.3 -1 -0.1
0105 0.5 0.7 1.8 1.9 2.1 -0.1 -1.1 0 -1.6 -0.2 -0.6 0.2 -0.3 -1.3 0.2 -0.1 0.5 -0.6 -2 0
Select residue pair below:
i_j Score Prob
0095_0105 1.054 0.95
0095_0140 1.026 0.94
0044_0095 0.729 0.65
0089_0095 0.670 0.56
0095_0133 0.642 0.51
Local Interactions:
i_j Score Prob
0095_0096 0.954 0.90
0094_0095 0.888 0.85
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...

Page generated in 0.0342 seconds.