OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [V:0089] and [L:0095]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.3	0.5	0	0.1	-0.1	-0.7	-0.3	0.4	0	-0.1	-0.2	0.2	-0.2	0.3	-0.2	0	-0.1	0	0.2	0.3
F	0.1	0.1	-0.1	0.3	-0.2	0.6	-0.2	-0.2	-0.1	-0.1	-0.1	0.4	0.2	-0.1	-0.1	0.4	0.3	-0.2	-0.1	-0.7
I	0.4	-0.8	0.5	0	0.6	0.9	-0.4	-0.3	-0.1	-0.1	-0.1	-0.1	0.1	0	-0.1	-0.2	-0.5	-0.1	-0.1	0.2
L	0.4	-0.1	0.2	0.1	0.5	0.3	-0.1	-0.6	0	-0.1	0.5	-0.1	-0.3	0	-0.2	-0.4	-0.4	0.4	0.1	0.3
V	-0.5	-0.3	0.6	0.1	0.5	0.1	1.1	-0.9	-0.1	-0.1	-0.1	0.3	0.1	-0.1	-0.1	0	-0.5	0.2	-0.1	0
M	-0.2	-0.1	0.5	0.1	0.9	-0.3	-0.1	-0.7	0	0	0	-0.1	0	0	0.2	-0.2	-0.1	-0.1	0	-0.2
W	-0.5	0.4	0.1	-0.3	0.1	-0.2	0	-0.3	0	0	0	0	0	0	0	0.2	-0.1	0	0	-0.1
Y	-0.4	0.3	-0.1	0.8	0.1	0.1	0.1	-0.5	-0.1	0	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0.8	-0.2	-0.1	-0.5
D	-0.2	0.1	0.4	0.2	0.1	-0.1	0.6	1.3	0.1	-0.1	-0.2	-0.2	-0.1	-0.1	-0.1	-0.1	-0.4	-0.4	-0.2	0.9
E	0.1	0.5	-0.4	-0.2	0	-0.3	0.3	0.5	0	0	0.2	-0.1	0	0	0	-0.2	-0.2	-0.1	0	-0.2
K	0.1	-0.3	-0.4	-0.7	0.1	0	-0.2	0.7	-0.1	0	0.2	0.2	0	0	0	-0.3	-0.1	-0.2	-0.1	0.2
R	0.5	-0.6	-0.1	0	0.3	0.5	0	-0.5	-0.1	-0.1	-0.1	0.1	-0.1	-0.1	0.2	-0.2	0.4	0	0.2	-0.7
H	0.3	0.4	0.1	0.5	0.1	-0.4	-0.3	-0.1	-0.1	-0.1	-0.1	0.3	-0.1	0	0.3	-0.3	0.3	0	-0.2	0
N	0.2	-0.1	0	0.4	-0.2	-0.1	-0.2	0.2	-0.2	-0.1	-0.1	-0.2	0	-0.2	-0.1	0.6	0.7	0.1	-0.1	-0.4
Q	-0.4	0.9	-0.5	-0.1	-0.6	0.1	-0.2	0.3	-0.1	0	0	-0.1	0	0	0	0.3	0.1	-0.2	0	0
S	0.2	0.4	0.4	0.5	0.2	0.1	-0.2	0.2	0.7	0.1	-0.4	-0.5	0	-0.3	-0.2	-0.3	0	-0.2	0	0.2
T	-0.1	-0.6	0.4	0.5	0.3	-0.2	0.1	-0.5	-0.1	-0.1	-0.1	-0.2	-0.1	0.1	0	0.5	0.2	-0.2	-0.1	0.4
G	0	0.4	0	0.1	-0.5	-0.4	-0.3	1.2	-0.1	0.1	-0.1	0	-0.1	-0.1	0.1	-0.3	-0.1	-0.1	-0.1	0.7
P	-0.3	-0.5	0	0.3	-0.7	-0.1	0.1	0.4	0	0	0	0	0	0	0	-0.2	-0.2	0.8	0.2	-0.1
C	0.3	0.1	0	-0.3	-0.1	0.4	0	-0.4	-0.1	-0.1	0	0	-0.1	0.1	-0.1	0.4	0	0.2	-0.1	-0.7

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0089	0.7	-0.1	0.1	0.6	0.5	-0.8	-1.2	-0.5	0.6	-0.3	-1.2	-0.7	0.1	0.5	-0.6	1.3	0.5	0.5	-0.7	0.4
0095	0.2	1.4	2	2.5	1.8	0.7	-0.2	0.6	-1.1	-1.4	-1.1	-0.6	-1.2	-1.1	-1	-0.1	-0.2	-0.3	-1	-0.1

Select residue pair below:

i_j	Score	Prob
0095_0105	1.054	0.95
0095_0140	1.026	0.94
0044_0095	0.729	0.65
0089_0095	0.670	0.56
0095_0133	0.642	0.51

Local Interactions:

i_j	Score	Prob
0095_0096	0.954	0.90
0094_0095	0.888	0.85

See all coupling residues
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