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OPENSEQ.org

SUFC - SUFD
UniProt: P77499 - P77689
Length: 671
Sequences: 1314
Seq/Len: 2.05
I_Prob: 0.03

SUFC - Probable ATP-dependent transporter SufC
Paralog alert: 0.94 [within 20: 0.88] - ratio of genomes with paralogs
Cluster includes: ARTP BTUD CCMA CYSA DDPD DDPF DPPD DPPF FBPC FECE FEPC FHUC FTSE GLNQ GLTL HISP LIVF LIVG LOLD LPTB MALK METN MLAF MODC NIKD NIKE OPPD OPPF PHNC PHNK PHNL POTA POTG PROV PSTB SAPD SAPF SSUB SUFC TAUB THIQ UGPC YADG YBBA YBBL YCJV YDCT YECC YEHX YHDZ YNJD ZNUC
SUFD - FeS cluster assembly protein SufD
Paralog alert: 0.61 [within 20: 0.38] - ratio of genomes with paralogs
Cluster includes: SUFB SUFD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
73_E 376_R 1.23 0.03
24_V 105_G 0.97 0.02
9_V 45_K 0.87 0.01
90_I 326_T 0.86 0.01
182_K 293_G 0.85 0.01
83_A 377_S 0.81 0.01
11_V 388_M 0.76 0.01
134_P 397_L 0.76 0.01
102_A 276_P 0.75 0.01
129_A 211_A 0.74 0.01
59_T 38_R 0.74 0.01
55_V 105_G 0.74 0.01
44_S 181_A 0.73 0.01
232_L 57_L 0.73 0.01
55_V 65_I 0.73 0.01
185_A 304_I 0.72 0.01
199_I 292_K 0.72 0.01
161_V 261_L 0.72 0.01
133_M 418_L 0.72 0.01
80_I 106_Y 0.71 0.01
133_M 229_A 0.71 0.01
13_D 142_V 0.71 0.01
218_V 68_E 0.70 0.01
182_K 295_C 0.70 0.01
212_K 406_L 0.70 0.01
24_V 309_G 0.70 0.01
199_I 145_G 0.70 0.01
213_P 315_G 0.69 0.01
6_D 211_A 0.69 0.01
59_T 380_I 0.69 0.01
219_L 389_I 0.68 0.01
18_R 31_Q 0.68 0.01
64_G 382_Q 0.67 0.01
60_V 416_Q 0.67 0.01
68_L 128_H 0.67 0.01
223_R 43_T 0.67 0.01
55_V 308_K 0.66 0.01
4_I 112_D 0.66 0.01
4_I 75_D 0.66 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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