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OPENSEQ.org

YCJR - YCJS
UniProt: P76044 - P77503
Length: 613
Sequences: 1648
Seq/Len: 2.72
I_Prob: 0.00

YCJR - Uncharacterized protein YcjR
Paralog alert: 0.70 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: END4 FRLC HYI SGBU ULAE YCJR YGBM
YCJS - Uncharacterized oxidoreductase YcjS
Paralog alert: 0.80 [within 20: 0.23] - ratio of genomes with paralogs
Cluster includes: YCEM YCJS YDGJ YGJR YHHX YJHC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
50_E 337_A 0.72 0.00
91_V 110_E 0.70 0.00
24_E 349_V 0.69 0.00
172_K 142_R 0.67 0.00
46_A 14_I 0.63 0.00
203_H 13_A 0.63 0.00
234_Q 94_E 0.63 0.00
53_L 114_E 0.61 0.00
232_N 114_E 0.61 0.00
224_L 105_P 0.61 0.00
24_E 342_S 0.60 0.00
138_R 246_G 0.60 0.00
53_L 188_I 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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