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OPENSEQ.org
GSIC - GSID
UniProt: P75798 - P75799
Length: 609
Sequences: 5178
Seq/Len: 8.91
I_Prob: 1.00
GSIC - Glutathione transport system permease protein GsiC
Paralog alert: 0.82 [within 20: 0.35] - ratio of genomes with paralogs
Cluster includes: DDPB DDPC DPPB DPPC GSIC GSID NIKB NIKC OPPB OPPC SAPB SAPC YEJB YEJE 		GSID - Glutathione transport system permease protein GsiD
Paralog alert: 0.77 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: DDPB DDPC DPPB DPPC GSIC GSID NIKB NIKC OPPB OPPC SAPB SAPC YEJB YEJE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3rlfG:F:F:GContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
146_A 276_A 2.94 1.00
248_V 239_S 2.46 1.00
18_I 143_V 2.21 0.99
296_Y 188_L 1.67 0.96
296_Y 185_G 1.50 0.93
190_R 291_D 1.39 0.90
202_E 300_K 1.33 0.87
198_D 220_S 1.22 0.81
26_F 155_A 1.16 0.77
191_F 225_F 1.12 0.73
11_G 135_R 1.10 0.71
124_R 301_I 1.05 0.66
22_L 143_V 1.03 0.64
237_L 145_F 1.02 0.63
138_S 280_F 1.02 0.62
141_S 287_N 1.01 0.62
202_E 193_Q 0.96 0.55
300_N 189_V 0.91 0.49
197_V 294_R 0.83 0.39
229_I 185_G 0.80 0.36
190_R 287_N 0.80 0.35
197_V 295_D 0.80 0.35
233_T 185_G 0.79 0.34
145_F 238_A 0.73 0.27
149_M 272_A 0.73 0.27
142_F 280_F 0.72 0.26
146_A 272_A 0.70 0.23
68_Y 269_P 0.69 0.23
153_Q 273_V 0.69 0.23
8_R 139_R 0.69 0.22
146_A 273_V 0.68 0.22
40_G 177_P 0.64 0.18
149_M 262_R 0.64 0.17
303_I 192_Q 0.63 0.17
11_G 139_R 0.62 0.16
15_T 143_V 0.61 0.15
303_I 188_L 0.60 0.14
248_V 233_S 0.59 0.14
289_N 181_R 0.57 0.12
7_K 135_R 0.57 0.12
198_D 294_R 0.56 0.12
190_R 224_V 0.56 0.12
203_D 300_K 0.56 0.12
278_I 155_A 0.56 0.12
30_L 151_L 0.56 0.11
233_T 182_L 0.55 0.11
193_R 295_D 0.55 0.11
233_T 181_R 0.55 0.11
246_S 150_I 0.55 0.11
146_A 277_L 0.55 0.11
293_D 138_M 0.54 0.10
90_E 253_E 0.54 0.10
289_N 145_F 0.53 0.10
240_G 104_S 0.53 0.10
240_G 145_F 0.53 0.10
234_M 182_L 0.52 0.09
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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