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OPENSEQ.org

MENC - MEND
UniProt: P29208 - P17109
Length: 876
Sequences: 539
Seq/Len: 0.63
I_Prob: 0.00

MENC - o-succinylbenzoate synthase
Paralog alert: 0.56 [within 20: 0.15] - ratio of genomes with paralogs
Cluster includes: AEEP DGOD GUDD GUDX MENC RHMD RSPA
MEND - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
Paralog alert: 0.81 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: GCL ILVB ILVG ILVI MEND OXC POXB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
11_I 401_S 1.24 0.00
191_E 449_L 1.08 0.00
176_K 464_L 1.08 0.00
122_A 465_I 1.06 0.00
136_L 113_D 1.05 0.00
179_N 397_I 1.04 0.00
26_T 240_W 1.03 0.00
178_V 282_V 1.02 0.00
289_L 117_N 1.01 0.00
167_T 354_E 1.00 0.00
215_S 96_T 0.99 0.00
186_I 380_L 0.98 0.00
19_L 104_T 0.98 0.00
281_L 486_E 0.98 0.00
128_K 394_V 0.98 0.00
67_V 248_L 0.96 0.00
197_D 439_I 0.95 0.00
267_S 91_I 0.95 0.00
133_K 79_S 0.94 0.00
277_I 349_I 0.94 0.00
88_S 489_Y 0.94 0.00
11_I 436_T 0.93 0.00
25_K 43_E 0.93 0.00
119_L 329_N 0.93 0.00
268_S 279_A 0.92 0.00
254_A 248_L 0.92 0.00
179_N 104_T 0.92 0.00
63_L 223_V 0.92 0.00
275_A 390_N 0.91 0.00
288_G 395_R 0.90 0.00
295_M 97_G 0.90 0.00
121_L 26_I 0.89 0.00
210_I 502_A 0.89 0.00
5_Q 225_V 0.89 0.00
290_D 533_I 0.89 0.00
151_E 239_L 0.89 0.00
146_V 360_V 0.88 0.00
158_L 532_V 0.88 0.00
189_L 334_L 0.88 0.00
141_R 439_I 0.87 0.00
172_Q 466_V 0.87 0.00
209_A 73_V 0.87 0.00
162_A 425_A 0.85 0.00
147_N 540_T 0.84 0.00
277_I 100_L 0.84 0.00
115_D 280_Q 0.84 0.00
168_P 184_S 0.83 0.00
158_L 342_R 0.83 0.00
262_S 117_N 0.82 0.00
120_K 225_V 0.82 0.00
243_E 505_E 0.82 0.00
268_S 223_V 0.82 0.00
192_P 395_R 0.81 0.00
25_K 464_L 0.81 0.00
176_K 126_F 0.81 0.00
26_T 309_V 0.81 0.00
133_K 414_G 0.81 0.00
298_Q 447_Y 0.81 0.00
155_D 410_Y 0.81 0.00
116_D 41_A 0.81 0.00
32_V 224_V 0.80 0.00
93_E 169_P 0.80 0.00
193_C 186_Q 0.80 0.00
160_L 218_R 0.80 0.00
154_P 53_F 0.80 0.00
288_G 418_I 0.80 0.00
129_V 117_N 0.80 0.00
51_F 38_T 0.80 0.00
191_E 463_V 0.79 0.00
280_W 380_L 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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