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OPENSEQ.org
SOXS - YMGE
UniProt: P0A9E2 - P76011
Length: 191
Sequences: 179
Seq/Len: 0.96
I_Prob: 0.13
SOXS - Regulatory protein SoxS
Paralog alert: 0.87 [within 20: 0.44] - ratio of genomes with paralogs
Cluster includes: ADIY APPY ARAC CHBR ENVY EUTR FEAR GADW GADX MARA MELR RHAR RHAS SOXS YBCM YDEO YDIP YEAM YIDL YIJO YKGD YPDC YQHC 		YMGE - UPF0410 protein ymge
Paralog alert: 0.50 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: YEAQ YMGE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
14_I 77_I 1.68 0.13
59_L 12_I 0.93 0.01
10_L 73_L 0.87 0.01
70_E 8_I 0.86 0.01
93_R 34_I 0.85 0.01
73_I 16_I 0.85 0.01
24_I 77_I 0.85 0.01
55_R 38_V 0.85 0.01
92_F 46_L 0.84 0.01
88_F 69_V 0.84 0.01
43_R 34_I 0.83 0.01
32_G 69_V 0.82 0.01
83_V 67_A 0.82 0.01
82_Y 73_L 0.82 0.01
73_I 81_L 0.80 0.01
105_H 83_R 0.80 0.01
82_Y 37_I 0.80 0.01
97_D 4_I 0.79 0.01
12_A 37_I 0.79 0.01
68_T 42_V 0.79 0.01
52_D 37_I 0.78 0.01
103_Y 41_V 0.77 0.01
102_D 4_I 0.77 0.01
69_T 73_L 0.77 0.01
82_Y 71_A 0.76 0.01
83_V 40_A 0.76 0.01
29_K 37_I 0.75 0.01
88_F 72_I 0.75 0.01
67_R 4_I 0.75 0.01
10_L 74_V 0.75 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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