| UniProt: | P39206 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12608 | ||
| Length: | 196 (173) | ||
| Sequences: | 1764 | ||
| Seq/Len: | 10.20 |
| CAIE
Paralog alert: 0.39 [within 20: 0.01] - ratio of genomes with paralogs Cluster includes: CAIE MAA PAAY THGA WBBJ WCAF YRDA |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 55_G | 77_N | 3.362 | 1.00 | |
| 64_M | 72_T | 3.244 | 1.00 | |
| 14_H | 33_A | 2.684 | 1.00 | |
| 127_G | 133_L | 2.635 | 1.00 | |
| 92_G | 111_E | 2.537 | 1.00 | |
| 33_A | 54_A | 2.465 | 1.00 | |
| 94_D | 112_E | 2.414 | 1.00 | |
| 54_A | 76_E | 2.369 | 1.00 | |
| 75_G | 93_R | 2.318 | 1.00 | |
| 34_G | 55_G | 2.301 | 1.00 | |
| 108_V | 126_R | 2.258 | 1.00 | |
| 116_A | 134_M | 2.258 | 1.00 | |
| 70_T | 106_G | 2.15 | 1.00 | |
| 9_L | 28_D | 2.145 | 1.00 | |
| 112_E | 130_R | 2.126 | 1.00 | |
| 39_P | 166_C | 2.113 | 1.00 | |
| 77_N | 94_D | 2.09 | 1.00 | |
| 86_L | 89_C | 2.024 | 1.00 | |
| 30_I | 51_I | 1.958 | 1.00 | |
| 63_I | 83_G | 1.884 | 1.00 | |
| 93_R | 111_E | 1.87 | 1.00 | |
| 35_V | 76_E | 1.835 | 1.00 | |
| 25_L | 29_V | 1.824 | 1.00 | |
| 32_G | 54_A | 1.802 | 1.00 | |
| 76_E | 93_R | 1.796 | 1.00 | |
| 20_H | 39_P | 1.772 | 1.00 | |
| 12_V | 30_I | 1.762 | 1.00 | |
| 55_G | 160_Q | 1.755 | 1.00 | |
| 103_I | 107_A | 1.741 | 1.00 | |
| 113_S | 131_Q | 1.696 | 1.00 | |
| 111_E | 129_K | 1.693 | 1.00 | |
| 41_A | 62_C | 1.692 | 1.00 | |
| 110_G | 126_R | 1.676 | 1.00 | |
| 142_R | 148_E | 1.659 | 1.00 | |
| 5_A | 8_G | 1.621 | 1.00 | |
| 22_S | 40_L | 1.616 | 1.00 | |
| 16_T | 34_G | 1.6 | 1.00 | |
| 122_K | 125_F | 1.573 | 1.00 | |
| 25_L | 31_V | 1.568 | 1.00 | |
| 130_R | 149_L | 1.553 | 1.00 | |
| 133_L | 140_A | 1.543 | 1.00 | |
| 92_G | 108_V | 1.538 | 1.00 | |
| 110_G | 129_K | 1.487 | 1.00 | |
| 62_C | 84_A | 1.463 | 1.00 | |
| 13_V | 17_A | 1.458 | 1.00 | |
| 145_S | 148_E | 1.446 | 1.00 | |
| 7_E | 165_R | 1.444 | 1.00 | |
| 5_A | 10_I | 1.417 | 1.00 | |
| 28_D | 49_R | 1.336 | 0.99 | |
| 61_G | 83_G | 1.314 | 0.99 | |
| 105_D | 123_A | 1.297 | 0.99 | |
| 115_V | 127_G | 1.292 | 0.99 | |
| 113_S | 129_K | 1.289 | 0.99 | |
| 121_V | 138_A | 1.287 | 0.99 | |
| 31_V | 37_I | 1.267 | 0.99 | |
| 37_I | 43_L | 1.243 | 0.98 | |
| 16_T | 33_A | 1.242 | 0.98 | |
| 58_I | 80_I | 1.222 | 0.98 | |
| 131_Q | 140_A | 1.211 | 0.98 | |
| 90_L | 108_V | 1.208 | 0.98 | |
| 102_V | 118_M | 1.207 | 0.98 | |
| 110_G | 128_E | 1.193 | 0.98 | |
| 40_L | 61_G | 1.156 | 0.97 | |
| 79_H | 155_N | 1.141 | 0.97 | |
| 122_K | 138_A | 1.127 | 0.97 | |
| 128_E | 133_L | 1.122 | 0.97 | |
| 131_Q | 143_N | 1.121 | 0.97 | |
| 95_A | 113_S | 1.121 | 0.97 | |
| 115_V | 133_L | 1.115 | 0.96 | |
| 85_I | 100_N | 1.111 | 0.96 | |
| 115_V | 138_A | 1.102 | 0.96 | |
| 140_A | 143_N | 1.096 | 0.96 | |
| 15_P | 33_A | 1.075 | 0.95 | |
| 83_G | 100_N | 1.072 | 0.95 | |
| 133_L | 138_A | 1.067 | 0.95 | |
| 112_E | 149_L | 1.064 | 0.95 | |
| 119_S | 138_A | 1.062 | 0.95 | |
| 30_I | 49_R | 1.057 | 0.95 | |
| 32_G | 76_E | 1.04 | 0.94 | |
| 84_A | 101_S | 1.034 | 0.94 | |
| 29_V | 45_G | 1.034 | 0.94 | |
| 31_V | 35_V | 1.027 | 0.94 | |
| 85_I | 99_M | 1.023 | 0.93 | |
| 128_E | 131_Q | 1.023 | 0.93 | |
| 77_N | 160_Q | 1.012 | 0.93 | |
| 134_M | 141_V | 1.009 | 0.93 | |
| 14_H | 17_A | 1.007 | 0.93 | |
| 22_S | 39_P | 1.007 | 0.93 | |
| 128_E | 140_A | 1.003 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1v3wA | 1 | 0.8827 | 100 | 0.471 | Contact Map | 0.803 |
| 1xhdA | 1 | 0.8724 | 100 | 0.479 | Contact Map | 0.807 |
| 3r3rA | 1 | 0.8929 | 100 | 0.48 | Contact Map | 0.848 |
| 3ixcA | 1 | 0.852 | 100 | 0.491 | Contact Map | 0.819 |
| 3r1wA | 3 | 0.8827 | 100 | 0.495 | Contact Map | 0.871 |
| 4mfgA | 4 | 0.8469 | 100 | 0.503 | Contact Map | 0.846 |
| 3c8vA | 4 | 0.949 | 100 | 0.507 | Contact Map | 0.599 |
| 3hsqA | 3 | 0.9745 | 100 | 0.535 | Contact Map | 0.694 |
| 3tv0A | 2 | 0.8827 | 100 | 0.543 | Contact Map | 0.753 |
| 1j2zA | 1 | 0.9745 | 100 | 0.545 | Contact Map | 0.645 |
Sequence Conservation (Image Generated using WebLogo v3)