| UniProt: | P0AED0 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11390 | ||
| Length: | 144 (139) | ||
| Sequences: | 6454 | ||
| Seq/Len: | 46.43 |
| USPA
Paralog alert: 0.77 [within 20: 0.20] - ratio of genomes with paralogs Cluster includes: USPA USPC USPD USPF USPG |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 33_K | 83_E | 2.651 | 1.00 | |
| 5_H | 35_S | 2.628 | 1.00 | |
| 5_H | 33_K | 2.561 | 1.00 | |
| 124_R | 128_N | 2.431 | 1.00 | |
| 92_G | 125_Q | 2.419 | 1.00 | |
| 9_A | 109_C | 2.391 | 1.00 | |
| 106_L | 135_L | 2.387 | 1.00 | |
| 35_S | 85_L | 2.266 | 1.00 | |
| 7_L | 104_M | 2.261 | 1.00 | |
| 99_I | 107_V | 2.077 | 1.00 | |
| 98_A | 102_Y | 2.046 | 1.00 | |
| 109_C | 126_L | 2.043 | 1.00 | |
| 89_G | 94_V | 1.922 | 1.00 | |
| 111_H | 138_P | 1.912 | 1.00 | |
| 85_L | 98_A | 1.849 | 1.00 | |
| 22_K | 135_L | 1.846 | 1.00 | |
| 35_S | 102_Y | 1.83 | 1.00 | |
| 107_V | 130_V | 1.692 | 1.00 | |
| 35_S | 104_M | 1.689 | 1.00 | |
| 100_K | 131_H | 1.687 | 1.00 | |
| 94_V | 97_D | 1.683 | 1.00 | |
| 127_I | 136_I | 1.683 | 1.00 | |
| 8_I | 23_A | 1.672 | 1.00 | |
| 111_H | 136_I | 1.662 | 1.00 | |
| 3_Y | 22_K | 1.648 | 1.00 | |
| 87_G | 94_V | 1.647 | 1.00 | |
| 67_H | 71_T | 1.624 | 1.00 | |
| 21_E | 76_N | 1.563 | 1.00 | |
| 35_S | 98_A | 1.543 | 1.00 | |
| 74_S | 84_T | 1.502 | 1.00 | |
| 38_H | 66_T | 1.496 | 1.00 | |
| 9_A | 95_L | 1.467 | 1.00 | |
| 23_A | 27_A | 1.451 | 1.00 | |
| 39_V | 94_V | 1.4 | 0.99 | |
| 33_K | 81_I | 1.361 | 0.99 | |
| 107_V | 132_V | 1.342 | 0.99 | |
| 35_S | 83_E | 1.316 | 0.99 | |
| 26_M | 30_Y | 1.309 | 0.99 | |
| 37_I | 98_A | 1.308 | 0.99 | |
| 20_V | 73_L | 1.299 | 0.99 | |
| 96_V | 129_T | 1.297 | 0.99 | |
| 96_V | 126_L | 1.295 | 0.99 | |
| 63_S | 67_H | 1.28 | 0.99 | |
| 37_I | 95_L | 1.279 | 0.99 | |
| 130_V | 134_M | 1.276 | 0.99 | |
| 17_K | 76_N | 1.267 | 0.99 | |
| 22_K | 25_S | 1.252 | 0.99 | |
| 125_Q | 129_T | 1.249 | 0.99 | |
| 22_K | 133_D | 1.233 | 0.98 | |
| 74_S | 78_G | 1.221 | 0.98 | |
| 25_S | 29_P | 1.21 | 0.98 | |
| 8_I | 20_V | 1.207 | 0.98 | |
| 3_Y | 133_D | 1.203 | 0.98 | |
| 91_L | 122_S | 1.202 | 0.98 | |
| 13_S | 113_Q | 1.202 | 0.98 | |
| 123_A | 136_I | 1.193 | 0.98 | |
| 96_V | 99_I | 1.18 | 0.98 | |
| 13_S | 16_S | 1.176 | 0.98 | |
| 6_I | 106_L | 1.168 | 0.97 | |
| 87_G | 98_A | 1.168 | 0.97 | |
| 24_V | 77_A | 1.166 | 0.97 | |
| 85_L | 102_Y | 1.149 | 0.97 | |
| 99_I | 131_H | 1.144 | 0.97 | |
| 107_V | 126_L | 1.094 | 0.96 | |
| 97_D | 101_K | 1.09 | 0.96 | |
| 5_H | 104_M | 1.089 | 0.96 | |
| 16_S | 19_L | 1.088 | 0.96 | |
| 95_L | 126_L | 1.077 | 0.95 | |
| 23_A | 34_V | 1.075 | 0.95 | |
| 59_Q | 63_S | 1.058 | 0.95 | |
| 99_I | 104_M | 1.033 | 0.94 | |
| 26_M | 108_V | 1.03 | 0.94 | |
| 69_A | 73_L | 1.02 | 0.93 | |
| 5_H | 105_D | 1.004 | 0.93 | |
| 27_A | 32_A | 1.004 | 0.93 | |
| 10_V | 73_L | 1.002 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3tnjA | 1 | 0.9792 | 99.9 | 0.138 | Contact Map | 0.77 |
| 2dumA | 4 | 1 | 99.9 | 0.149 | Contact Map | 0.792 |
| 1mjhA | 2 | 0.9861 | 99.9 | 0.157 | Contact Map | 0.892 |
| 3s3tA | 8 | 0.9514 | 99.9 | 0.16 | Contact Map | 0.724 |
| 1jmvA | 4 | 0.9722 | 99.9 | 0.165 | Contact Map | 0.791 |
| 3olqA | 1 | 1 | 99.9 | 0.166 | Contact Map | 0.772 |
| 3fg9A | 6 | 0.9375 | 99.9 | 0.177 | Contact Map | 0.708 |
| 2gm3A | 6 | 1 | 99.9 | 0.18 | Contact Map | 0.824 |
| 3hgmA | 4 | 0.9375 | 99.9 | 0.191 | Contact Map | 0.891 |
| 1tq8A | 6 | 0.9931 | 99.9 | 0.192 | Contact Map | 0.721 |
Sequence Conservation (Image Generated using WebLogo v3)