| UniProt: | P0ABU0 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11368 | ||
| Length: | 285 (259) | ||
| Sequences: | 11411 | ||
| Seq/Len: | 44.06 |
| MENB
Paralog alert: 0.65 [within 20: 0.21] - ratio of genomes with paralogs Cluster includes: CAID MENB PAAF PAAG SCPB |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 203_T | 213_E | 3.32 | 1.00 | |
| 148_D | 206_P | 3.216 | 1.00 | |
| 151_I | 189_Q | 3.091 | 1.00 | |
| 213_E | 216_R | 3.077 | 1.00 | |
| 146_A | 201_V | 2.886 | 1.00 | |
| 36_K | 215_V | 2.675 | 1.00 | |
| 64_R | 119_P | 2.66 | 1.00 | |
| 188_R | 220_E | 2.651 | 1.00 | |
| 149_N | 207_L | 2.639 | 1.00 | |
| 124_A | 141_C | 2.443 | 1.00 | |
| 26_R | 40_N | 2.396 | 1.00 | |
| 191_D | 194_Q | 2.389 | 1.00 | |
| 194_Q | 197_D | 2.318 | 1.00 | |
| 158_K | 224_N | 2.299 | 1.00 | |
| 268_N | 272_Q | 2.226 | 1.00 | |
| 179_K | 198_M | 2.203 | 1.00 | |
| 125_M | 214_T | 2.156 | 1.00 | |
| 182_E | 188_R | 2.146 | 1.00 | |
| 45_R | 80_K | 2.09 | 1.00 | |
| 209_D | 212_K | 2.077 | 1.00 | |
| 148_D | 193_K | 2.048 | 1.00 | |
| 61_A | 114_Q | 1.991 | 1.00 | |
| 125_M | 211_E | 1.981 | 1.00 | |
| 45_R | 81_A | 1.938 | 1.00 | |
| 145_I | 205_V | 1.928 | 1.00 | |
| 184_W | 232_L | 1.921 | 1.00 | |
| 75_T | 127_A | 1.895 | 1.00 | |
| 35_A | 63_A | 1.877 | 1.00 | |
| 182_E | 202_N | 1.872 | 1.00 | |
| 131_I | 153_G | 1.842 | 1.00 | |
| 182_E | 203_T | 1.83 | 1.00 | |
| 193_K | 197_D | 1.804 | 1.00 | |
| 38_T | 77_A | 1.796 | 1.00 | |
| 194_Q | 198_M | 1.792 | 1.00 | |
| 72_I | 118_C | 1.791 | 1.00 | |
| 148_D | 207_L | 1.79 | 1.00 | |
| 29_K | 66_D | 1.782 | 1.00 | |
| 51_L | 55_E | 1.778 | 1.00 | |
| 40_N | 77_A | 1.748 | 1.00 | |
| 33_G | 70_G | 1.746 | 1.00 | |
| 265_E | 274_R | 1.735 | 1.00 | |
| 145_I | 217_W | 1.726 | 1.00 | |
| 181_R | 237_N | 1.721 | 1.00 | |
| 29_K | 35_A | 1.71 | 1.00 | |
| 177_Q | 181_R | 1.687 | 1.00 | |
| 36_K | 75_T | 1.679 | 1.00 | |
| 181_R | 236_L | 1.675 | 1.00 | |
| 138_H | 144_T | 1.674 | 1.00 | |
| 188_R | 194_Q | 1.65 | 1.00 | |
| 181_R | 185_F | 1.622 | 1.00 | |
| 63_A | 72_I | 1.603 | 1.00 | |
| 27_Y | 35_A | 1.599 | 1.00 | |
| 31_T | 219_R | 1.588 | 1.00 | |
| 146_A | 152_F | 1.573 | 1.00 | |
| 144_T | 178_K | 1.552 | 1.00 | |
| 209_D | 213_E | 1.551 | 1.00 | |
| 215_V | 219_R | 1.53 | 1.00 | |
| 142_D | 233_K | 1.53 | 1.00 | |
| 39_I | 52_T | 1.511 | 1.00 | |
| 35_A | 69_I | 1.51 | 1.00 | |
| 157_P | 187_C | 1.485 | 1.00 | |
| 38_T | 75_T | 1.48 | 1.00 | |
| 57_I | 114_Q | 1.475 | 1.00 | |
| 261_E | 279_S | 1.474 | 1.00 | |
| 147_A | 207_L | 1.462 | 1.00 | |
| 196_L | 204_V | 1.436 | 1.00 | |
| 62_D | 66_D | 1.433 | 1.00 | |
| 37_I | 59_A | 1.424 | 1.00 | |
| 27_Y | 63_A | 1.409 | 1.00 | |
| 44_V | 89_K | 1.398 | 0.99 | |
| 115_I | 122_V | 1.389 | 0.99 | |
| 49_R | 52_T | 1.388 | 0.99 | |
| 127_A | 149_N | 1.361 | 0.99 | |
| 205_V | 213_E | 1.354 | 0.99 | |
| 127_A | 147_A | 1.347 | 0.99 | |
| 135_H | 154_Q | 1.342 | 0.99 | |
| 234_A | 238_A | 1.323 | 0.99 | |
| 210_L | 214_T | 1.321 | 0.99 | |
| 144_T | 174_I | 1.319 | 0.99 | |
| 192_A | 204_V | 1.317 | 0.99 | |
| 183_I | 190_Y | 1.312 | 0.99 | |
| 218_C | 222_L | 1.282 | 0.99 | |
| 73_I | 214_T | 1.273 | 0.99 | |
| 60_L | 118_C | 1.269 | 0.99 | |
| 147_A | 210_L | 1.263 | 0.99 | |
| 178_K | 202_N | 1.253 | 0.99 | |
| 30_S | 215_V | 1.247 | 0.99 | |
| 211_E | 215_V | 1.246 | 0.98 | |
| 153_G | 189_Q | 1.245 | 0.98 | |
| 30_S | 36_K | 1.243 | 0.98 | |
| 179_K | 182_E | 1.237 | 0.98 | |
| 211_E | 214_T | 1.235 | 0.98 | |
| 71_V | 218_C | 1.22 | 0.98 | |
| 126_V | 130_S | 1.213 | 0.98 | |
| 129_Y | 151_I | 1.207 | 0.98 | |
| 36_K | 211_E | 1.201 | 0.98 | |
| 221_M | 229_L | 1.2 | 0.98 | |
| 30_S | 219_R | 1.195 | 0.98 | |
| 41_R | 44_V | 1.189 | 0.98 | |
| 64_R | 114_Q | 1.183 | 0.98 | |
| 75_T | 211_E | 1.183 | 0.98 | |
| 224_N | 229_L | 1.177 | 0.98 | |
| 126_V | 152_F | 1.173 | 0.98 | |
| 179_K | 194_Q | 1.161 | 0.97 | |
| 41_R | 87_D | 1.156 | 0.97 | |
| 55_E | 59_A | 1.151 | 0.97 | |
| 176_G | 179_K | 1.148 | 0.97 | |
| 89_K | 271_N | 1.143 | 0.97 | |
| 242_G | 245_G | 1.139 | 0.97 | |
| 190_Y | 198_M | 1.133 | 0.97 | |
| 39_I | 83_C | 1.117 | 0.96 | |
| 143_L | 217_W | 1.114 | 0.96 | |
| 26_R | 77_A | 1.094 | 0.96 | |
| 57_I | 61_A | 1.09 | 0.96 | |
| 206_P | 209_D | 1.089 | 0.96 | |
| 193_K | 196_L | 1.081 | 0.95 | |
| 116_R | 170_Y | 1.073 | 0.95 | |
| 72_I | 120_K | 1.072 | 0.95 | |
| 50_P | 90_V | 1.067 | 0.95 | |
| 83_C | 134_G | 1.048 | 0.94 | |
| 113_R | 117_T | 1.042 | 0.94 | |
| 29_K | 62_D | 1.041 | 0.94 | |
| 28_E | 38_T | 1.038 | 0.94 | |
| 67_D | 120_K | 1.037 | 0.94 | |
| 264_Q | 268_N | 1.028 | 0.94 | |
| 64_R | 118_C | 1.026 | 0.94 | |
| 127_A | 210_L | 1.012 | 0.93 | |
| 227_M | 262_E | 1.01 | 0.93 | |
| 214_T | 218_C | 1.009 | 0.93 | |
| 171_M | 175_V | 1.006 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4i42A | 12 | 0.9965 | 100 | 0.102 | Contact Map | 0.866 |
| 4jcsA | 1 | 0.9439 | 100 | 0.168 | Contact Map | 0.622 |
| 4lk5A | 3 | 0.9789 | 100 | 0.175 | Contact Map | 0.704 |
| 2uzfA | 2 | 0.9579 | 100 | 0.176 | Contact Map | 0.749 |
| 4jfcA | 1 | 0.9228 | 100 | 0.177 | Contact Map | 0.701 |
| 4jwvA | 2 | 0.9193 | 100 | 0.177 | Contact Map | 0.677 |
| 1nzyA | 2 | 0.9228 | 100 | 0.178 | Contact Map | 0.723 |
| 3qxzA | 3 | 0.9158 | 100 | 0.178 | Contact Map | 0.757 |
| 4fzwC | 2 | 0.9509 | 100 | 0.178 | Contact Map | 0.659 |
| 3t8bA | 2 | 0.9965 | 100 | 0.178 | Contact Map | 0.735 |
Sequence Conservation (Image Generated using WebLogo v3)