May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ATOB - ATOD
UniProt: P76461 - P76458
Length: 614
Sequences: 580
Seq/Len: 0.95
I_Prob: 0.00

ATOB - Acetyl-CoA acetyltransferase
Paralog alert: 0.73 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: ATOB FADA FADI PAAJ YQEF
ATOD - Acetate CoA-transferase subunit alpha
Paralog alert: 0.43 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: ATOD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
95_V 74_I 1.02 0.00
186_K 213_I 0.88 0.00
171_I 154_I 0.88 0.00
31_A 13_G 0.85 0.00
171_I 189_P 0.85 0.00
316_A 214_I 0.84 0.00
43_I 50_I 0.78 0.00
367_Q 183_D 0.78 0.00
227_E 9_Q 0.77 0.00
296_A 159_C 0.77 0.00
384_Q 58_D 0.77 0.00
211_T 39_L 0.76 0.00
103_Q 186_L 0.74 0.00
10_V 187_V 0.73 0.00
107_A 46_D 0.73 0.00
46_Q 72_K 0.73 0.00
9_A 97_L 0.72 0.00
227_E 154_I 0.71 0.00
13_A 35_L 0.70 0.00
35_K 10_D 0.70 0.00
247_A 90_S 0.70 0.00
241_T 72_K 0.70 0.00
175_M 39_L 0.70 0.00
326_A 147_L 0.70 0.00
102_I 189_P 0.70 0.00
247_A 190_D 0.67 0.00
39_E 10_D 0.67 0.00
364_H 49_L 0.67 0.00
314_I 46_D 0.67 0.00
263_S 192_L 0.66 0.00
49_D 17_D 0.66 0.00
221_K 50_I 0.65 0.00
279_Y 39_L 0.65 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0525 seconds.